Gene
RNA
| Item | Value |
|---|---|
| gene id | G1254886 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048579.1 |
| NCBI id | CM023233.2 |
| chromosome length | 81569517 |
| location | 8149793 ~ 8150016 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| description |
|---|
| unnamed protein product, partial |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU1433547 | True | 224 | lncRNA | 0.51 | 1 | 8149793 | 8150016 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110490897 | LOC106590637 | coding | upstream | 55374 | 7899106 ~ 8094419 (+) |
| LOC110490896 | NA | coding | upstream | 283715 | 7863667 ~ 7866078 (+) |
| LOC110489541 | arhgap29 | coding | upstream | 1010230 | 7110207 ~ 7139563 (+) |
| LOC110489539 | LOC106590649 | coding | upstream | 1063905 | 7075115 ~ 7085888 (+) |
| LOC110490889 | LOC106578491 | coding | upstream | 1112034 | 7008276 ~ 7037759 (+) |
| LOC110489552 | LOC106590631 | coding | downstream | 291643 | 8441659 ~ 8453058 (+) |
| LOC110489555 | LOC106590626 | coding | downstream | 480337 | 8630353 ~ 8649744 (+) |
| LOC110489556 | LOC106590625 | coding | downstream | 519065 | 8669081 ~ 8672326 (+) |
| LOC110490900 | dok6 | coding | downstream | 673500 | 8823516 ~ 8956345 (+) |
| LOC110489557 | LOC106590621 | coding | downstream | 900528 | 9050544 ~ 9061028 (+) |
| G1254877 | NA | non-coding | upstream | 37638 | 8111900 ~ 8112155 (+) |
| G1254864 | NA | non-coding | upstream | 49813 | 8099762 ~ 8099980 (+) |
| G1254637 | NA | non-coding | upstream | 54102 | 8095181 ~ 8095691 (+) |
| G1254751 | NA | non-coding | upstream | 70133 | 8079460 ~ 8079660 (+) |
| G1254890 | NA | non-coding | downstream | 1170 | 8151186 ~ 8153429 (+) |
| G1254906 | NA | non-coding | downstream | 18459 | 8168475 ~ 8168685 (+) |
| G1254898 | NA | non-coding | downstream | 34702 | 8184718 ~ 8185844 (+) |
| G1254897 | LOC100286462 | non-coding | downstream | 40775 | 8190791 ~ 8214003 (+) |
| G1254916 | NA | non-coding | downstream | 49895 | 8199911 ~ 8200214 (+) |
| G1253720 | LOC106590648 | other | upstream | 1060758 | 7086331 ~ 7089035 (+) |
| alg14 | alg14 | other | upstream | 1148380 | 6997759 ~ 7002064 (+) |
| G1253703 | LOC106590651 | other | upstream | 1181377 | 6964482 ~ 6968416 (+) |
| LOC110490886 | LOC106590655 | other | upstream | 1821719 | 6242892 ~ 6328082 (+) |
| G1255589 | NA | other | downstream | 869229 | 9019245 ~ 9019731 (+) |
| G1257500 | NA | other | downstream | 2984828 | 11134844 ~ 11135414 (+) |
| G1257551 | NA | other | downstream | 3101911 | 11251927 ~ 11269539 (+) |
| LOC110489585 | dap1 | other | downstream | 3291332 | 11441274 ~ 11461528 (+) |
