G1255027


Basic Information

Item Value
gene id G1255027
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048579.1
NCBI id CM023233.2
chromosome length 81569517
location 8410530 ~ 8413178 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1433721
ttcaactcctctctctctatctctctctctctctgccttctctctctctctctctctgcattctctctctctctgccttctctctcctctctctctttgccttctctctctctctttgccttctctctctctctttgccttctctctcatctttctctctgccttctctctctctctgctttctttctttctttctctctctctctctgccgtctctctctctctgccttctctctctgacctctctctgccgtctctctctgccttctctctctctgctttctttctttctttctttctctctctctgcctttctctcctgtctctctctgccttctctctctctgccttcccctctctctctgccctctctctctctcacacactctttctctctctgtcccttcaactcctctctctctctctctgtcccttcaactcctctctctctatctctctctgccttctctctctctctctgcattctctctctctctttgccttctgtctctctctttgccttctctctctctctgccttctctctctctctgccttctctctctgccttctctctcctctttctctcttctctctctctgctttctttctttatttctttctctctctctctgccttctctctctctctctgccttctctctctctctgtcccttcaactctctctctctctctctctctctctctctctgtcccttcaactcccctctctctctctctctctctgtcccttcaactcctctctctctctctctgtcccttcaactcctctctctctctctctgtctctgtctgtctctgtctctctctgtctctctctgtctgtctgtctctctctgccttctctctctctctctctctgtctctctgcatgtaactctctctctctgccttctctctttatatataaataaatggtgggacaaacagcaataataatagtagtagtggacatgggattaccattaacaacaactacaacaacaatatttatgagaacaacaatacattaaagcaatggtagtagaccagtgtcaacgtgactgagaagacacatgacatggtttgaaagacagaaaaaaacaagatgggaaatattattgactttactttgcacttttcactggctgtccctcaggttgtggcaggaggacacatatttggctgccaaaactgcacatttaggcttttcacccaataaatattatatatttttcttcatcttttatagtttcaaattctttgtttgaattataattttgggaaagaaatattctcttaggtctgagtatttgtcacagtgtaataggaaatgcagctctgtctctacctctcccctggagcagagtgagcacagcctgtcctctctgggcagccaggtttgtctgtgacgaccggtctctatagccagactgtgctcactgagtctgtacctagtcaatgttttcctcagttttctatcagtcacagtggtcagatagtctgccaccatgtactgtctgtttagagccaaatagcattgaagtttactttgatttttgtggtgtctttccaataggtgatatatgtttatttttgttttgtgatgatttggttgggccagattttctgagtgctgtcctgaggctctatggggttggtttgggttggtgaactgagcctcagaaccagctggctgactgctgtcctgaggctctatggggttggtttgggttggtgaactgagcctcagaaccagctggctgagtgctgtcctgaggctctatggggttggtttgagttggtgaactgagcctcagaaccagctggctgaggggactcttctcttttttcatctcttgacattgtagagctgtgtgatggaatgttttggggtcacttgtttttaggtTGTTGTAAAATTTGATGGCTTTTTTTTCTATTTGAATGAGGAGGGtattggcccaattctgctctacatgcgttattttgagtttttctttgcacttgcaatattgtcttgcaaaactctgcatgcagtatttcgattggatgtttgtcccatttggtaaattcattattagagattggaccccatactttactgccatatagagcaattggttctataactgCTTGAAAAATGttgagccagattctaattggaatttcgattttgatgttccttttaatggcataaaatgctcttcttgctttgtctctcagcccaTTCATagccatgtgaaagctacctgtgttgctgatatttagtcctagatatgtgTAGTTTTTAGTGTGTTCTAATAGAACAGTGTCCAAATACaatttatatttgtcatccttatttctggacctttttttggaatatcattaatatttg

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1433721 True 2379 lncRNA 0.43 2 8410530 8413178
Loading

Neighbor

gene id symbol gene type direction distance location
LOC110490897 LOC106590637 coding upstream 316111 7899106 ~ 8094419 (+)
LOC110490896 NA coding upstream 544452 7863667 ~ 7866078 (+)
LOC110489541 arhgap29 coding upstream 1270967 7110207 ~ 7139563 (+)
LOC110489539 LOC106590649 coding upstream 1324642 7075115 ~ 7085888 (+)
LOC110490889 LOC106578491 coding upstream 1372771 7008276 ~ 7037759 (+)
LOC110489552 LOC106590631 coding downstream 28481 8441659 ~ 8453058 (+)
LOC110489555 LOC106590626 coding downstream 217175 8630353 ~ 8649744 (+)
LOC110489556 LOC106590625 coding downstream 255903 8669081 ~ 8672326 (+)
LOC110490900 dok6 coding downstream 410338 8823516 ~ 8956345 (+)
LOC110489557 LOC106590621 coding downstream 637366 9050544 ~ 9061028 (+)
G1254986 NA non-coding upstream 22586 8330795 ~ 8387944 (+)
G1255010 NA non-coding upstream 37818 8367690 ~ 8372712 (+)
G1254939 NA non-coding upstream 121500 8239724 ~ 8289030 (+)
G1254942 NA non-coding upstream 163858 8244821 ~ 8246672 (+)
G1254927 NA non-coding upstream 190243 8219695 ~ 8220287 (+)
G1255028 NA non-coding downstream 20 8413198 ~ 8413792 (+)
G1255060 NA non-coding downstream 76643 8489821 ~ 8490282 (+)
G1255066 NA non-coding downstream 90159 8503337 ~ 8503667 (+)
G1255090 NA non-coding downstream 135064 8548242 ~ 8548877 (+)
G1255103 NA non-coding downstream 174276 8587454 ~ 8587763 (+)
G1253720 LOC106590648 other upstream 1321495 7086331 ~ 7089035 (+)
alg14 alg14 other upstream 1409117 6997759 ~ 7002064 (+)
G1253703 LOC106590651 other upstream 1442114 6964482 ~ 6968416 (+)
LOC110490886 LOC106590655 other upstream 2082456 6242892 ~ 6328082 (+)
G1255589 NA other downstream 606067 9019245 ~ 9019731 (+)
G1257500 NA other downstream 2721666 11134844 ~ 11135414 (+)
G1257551 NA other downstream 2838749 11251927 ~ 11269539 (+)
LOC110489585 dap1 other downstream 3028170 11441274 ~ 11461528 (+)

Expression

G1255027 Expression in all Baseline Samples

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G1255027 Expression in each Bioproject

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G1255027 Expression in each Sample
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The chart has 1 Y axis displaying Expression. Range: 0 to 200.
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Co-expression Network