G1256929


Basic Information

Item Value
gene id G1256929
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048579.1
NCBI id CM023233.2
chromosome length 81569517
location 10265741 ~ 10266825 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1435855
GTTATGAGGAACTTTCAGTTggtgtttatatatattttttaccggTTTAACTGTGGCTGGTCTGTGTGATCAGAGGGAGGGGCAGCGGTCTGTAGCGTCCAGTCAGACTGGGGCCCCTGAGACGGGGAGCGGTCTGTAGCGTCCAGTCAGACTGGGGCCCCTGAGACGGGCAGCGGTCTGTAGCGTCCAGTCAGACTGGGGCCCCTGAGACGGGCAGCGGTCTGTAGCGTCCAGTCAGACTGGGGCCCCTGAGACGGGCAGCGGTCTGTAGCGTCCAGTCAGACTGGGGCCCCTGAGACGGGGAGCGGTCTGTAGCGTCCAGTCAGACTGGGGCCCCTGAGACGGGCAGCGGTCTGTAGCGTCCAGTCAGACTGGGGCCCCTGAGACGGGGAGCGGTCTGTAGCGTCCAGTCAGACTGGGGCCCCTGAGACGGGGAGCGGTCTGTAGCGTCCAGTCAGACTGGGGCCCCTGAGACGGGCAGCGGTCTGTAGCGTCCAGTCAGACTGTGGCCCCTGAGACGGGCAGCGGTCTGTAGCGTCCAGTCAGACTGTGGCCCCTGAGACGGGCAGCGGTC

Function

NR:

description
PREDICTED: DNA-directed RNA polymerase II subunit RPB1-like

GO: NA

KEGG:

id description

RNA

RNA id representative length rna type GC content exon number start site end site
TU1435855 True 574 lncRNA 0.64 2 10265741 10266825

Neighbor

gene id symbol gene type direction distance location
LOC110489568 LOC106590608 coding downstream 19181 10220497 ~ 10246560 (-)
LOC110489563 cbln2b coding downstream 843718 9418351 ~ 9422023 (-)
LOC110514162 LOC106590620 coding downstream 1301528 8963472 ~ 8964213 (-)
LOC110489554 LOC106590627 coding downstream 1639547 8597494 ~ 8626194 (-)
LOC110489553 arhg4 coding downstream 1729701 8458800 ~ 8536040 (-)
LOC110490904 LOC106590606 coding upstream 70192 10337017 ~ 10368733 (-)
LOC118938784 NA coding upstream 169668 10436449 ~ 10437044 (-)
trnac-gca-10 NA coding upstream 171570 10438395 ~ 10438466 (-)
LOC110489574 hgd coding upstream 178741 10445566 ~ 10459083 (-)
LOC110490822 NA coding upstream 327724 10594549 ~ 10600184 (-)
G1256921 NA non-coding downstream 39438 10225799 ~ 10226303 (-)
G1256893 NA non-coding downstream 49045 10215646 ~ 10216696 (-)
G1256905 NA non-coding downstream 72902 10192013 ~ 10192839 (-)
G1256899 NA non-coding downstream 81460 10184036 ~ 10184281 (-)
G1256898 NA non-coding downstream 82202 10183331 ~ 10183539 (-)
G1256928 NA non-coding upstream 48 10266873 ~ 10267907 (-)
G1256938 NA non-coding upstream 19826 10286651 ~ 10286882 (-)
G1256941 NA non-coding upstream 39133 10305958 ~ 10306219 (-)
G1256942 NA non-coding upstream 40067 10306892 ~ 10307229 (-)
G1256951 NA non-coding upstream 66496 10333321 ~ 10333604 (-)
G1256654 NA other downstream 390999 9873519 ~ 9874742 (-)
G1256146 NA other downstream 786923 9477813 ~ 9478818 (-)
G1255735 NA other downstream 1241738 9023584 ~ 9024003 (-)
G1254214 NA other downstream 2939285 7325712 ~ 7326456 (-)
G1253278 NA other downstream 3803181 6462202 ~ 6462560 (-)
LOC110489570 LOC106590600 other upstream 20848 10256343 ~ 10296042 (-)
G1257642 NA other upstream 551618 10818443 ~ 10818911 (-)
LOC110489593 LOC106590549 other upstream 2244047 12507315 ~ 12533443 (-)
LOC110489604 mllt10 other upstream 3075228 13288725 ~ 13369504 (-)
G1260199 NA other upstream 3119564 13386389 ~ 13387587 (-)

Expression


Co-expression Network