G1257685


Basic Information

Item Value
gene id G1257685
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048579.1
NCBI id CM023233.2
chromosome length 81569517
location 10896019 ~ 10896249 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1436748
ctgcagatcctctcaagctctgtcaggttggatggggagcatcgctgcacagctattttcaggtctctccagaaatgtttgatcgggttcaagtccgggctctggctgggccactcaaggacattcaaagacttgtcccgaagtcactcctgcattggcttggctgtgtgcttagggttgttgtcctgttggaaggtgaacctttgccccagtcgaGGTCCTGAgcaatct

Function

NR:

description
unnamed protein product, partial

GO: NA

KEGG:

id description

RNA

RNA id representative length rna type GC content exon number start site end site
TU1436748 True 231 lncRNA 0.53 1 10896019 10896249

Neighbor

gene id symbol gene type direction distance location
LOC110489580 LOC106590592 coding downstream 99423 10775696 ~ 10796596 (-)
LOC110490906 LOC106578456 coding downstream 184884 10685921 ~ 10711135 (-)
LOC118938942 NA coding downstream 221474 10673749 ~ 10674545 (-)
LOC118938941 NA coding downstream 222274 10672950 ~ 10673745 (-)
LOC118938785 NA coding downstream 247856 10647873 ~ 10648163 (-)
LOC110490908 LOC106590575 coding upstream 573525 11469774 ~ 11498449 (-)
ropn1l ropn1l coding upstream 613377 11509626 ~ 11525612 (-)
LOC110489583 LOC106590573 coding upstream 643380 11539629 ~ 11557471 (-)
LOC118938787 NA coding upstream 1129306 12025555 ~ 12029416 (-)
LOC110489593 LOC106590549 coding upstream 1611066 12507315 ~ 12533443 (-)
G1257683 NA non-coding downstream 6327 10889432 ~ 10889692 (-)
G1257681 NA non-coding downstream 9776 10885865 ~ 10886243 (-)
G1257680 NA non-coding downstream 11965 10883724 ~ 10884054 (-)
G1257677 NA non-coding downstream 16230 10879557 ~ 10879789 (-)
G1257674 NA non-coding downstream 23809 10870931 ~ 10872210 (-)
G1257686 NA non-coding upstream 2300 10898549 ~ 10898759 (-)
G1257702 NA non-coding upstream 24379 10920628 ~ 10920874 (-)
G1257704 NA non-coding upstream 26174 10922423 ~ 10922691 (-)
G1257709 NA non-coding upstream 36973 10933222 ~ 10933422 (-)
G1257712 NA non-coding upstream 56071 10952320 ~ 10952527 (-)
G1257642 NA other downstream 77108 10818443 ~ 10818911 (-)
LOC110489570 LOC106590600 other downstream 600029 10256343 ~ 10296042 (-)
G1256654 NA other downstream 1021277 9873519 ~ 9874742 (-)
G1256146 NA other downstream 1417201 9477813 ~ 9478818 (-)
G1255735 NA other downstream 1872016 9023584 ~ 9024003 (-)
LOC110489604 mllt10 other upstream 2445804 13288725 ~ 13369504 (-)
G1260199 NA other upstream 2490140 13386389 ~ 13387587 (-)
G1260226 LOC106590529 other upstream 2566616 13462865 ~ 13505161 (-)
G1260265 NA other upstream 2640821 13537070 ~ 13538208 (-)

Expression


Co-expression Network

Homologous

species gene id symbol gene type chromosome NCBI id location
tiger barb (Puntius tetrazona) G87552 NA non-coding NC_056710.1 CM032079.1 11799592 ~ 11800481 (-)