G1258076


Basic Information

Item Value
gene id G1258076
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048579.1
NCBI id CM023233.2
chromosome length 81569517
location 11496687 ~ 11601266 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1437246
AGCGCGAACACAGCGGTTTATTAATTAAACAAAGATATTCACACCATTAACAGAatgaaagaaaacaaagatattCACACCATTAACAGAgtgaaagaaaacaaagatattCACACCATTAACAGAgtgaaagaaaacaaagatattCACACCAGAGGGAACAatagaaggacagagagatggacagacaggtgGGTAGATGTAAGGCTAAGAGTGACGTCATTCTGCATTCAGATCTCATTATTTATAGGTCTGTAACGCCTATTGGTATAGAATAACAGCAGGATGAGGGAAGCGTGGGGAGCGTGTCTATGATTTGGGGACGGAGGGTGAGGGTTACTCCTGATTTGGGGACGGAGGGTGAAGGTTTCTCCTGATTTGGGGACGGAGGGTGAAGGTTACTCCTGATTTGGGGATGGGAGGTGAAGGTTACTCCTGATTTGGGGATGTGAGGTGAAGGTTACTCCTGATTTGGGGACGGAGGGTGAAGGTTTCTCCTGATTTGGGGACAGAGGGTGAAGGTTACTCCTGATTTGGGGACAGAGTGTGAAGGTTTCTCCTGATTTGGGGATTGGGGGTGAAGGTTTCTCCTGATTTGGGGACGGAGGGTGAAGGTTTCTCCTGATTTGGggattgggggtggggggggtgaaaTATACACCTGAATGTATGCCATAGGCAAGCTTGgaaccccacccccacccacaccTTCATAAatcagaaacaaaaacagaagccCACTAAGTAGCTGGTGTTTACACAGTCAAGGTTGGTTGCGGTATCTCATGAAACATTATCCTATAAAAAAGAGTATGAAAACTAGTGAAGAAGAAAGTACTCCGTAGAAAAAAAGCATTATATTAATGTGTCCTGGTAGAGAAGAAAGTAATCCAGGGTTGGTACGAAAGACAGTTCTtgacgtggtgtgtgtgtgtgtgtgtgagagaagctGCTTCAGTACCTGCCCCTCGTGCCACGCTTGGACAGCCTCAGTTGGAGGTGCAAGCTGGTGGCCCTGATATTTGGCAGTCTCGGCCATGTACACAGGCTTGCAGTGTGTGGCCTCCAGATTGCGGGCCTGACAAAAACTAGGGCAAAGCAGTAGGCTAGGTATTGCTctgggcagcctagctgtttggagaaggagcTGCTTTCTGTACCCTTGAGGACCAGGCAAACAGGggactttgaaatgtttggatccaTTTTTTGTAaatttgattggttgattcaaataaagtatttcatatatatatgtgtgtgtgtgtgtgtgtgtgtgtgtgtgcgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtttgtgtgtgtgtgtgtgtgtgtgtgtatgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtttc

Function

NR:

description
PREDICTED: uncharacterized protein LOC109083918

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1437246 True 1381 lncRNA 0.46 2 11496687 11601266

Neighbor

gene id symbol gene type direction distance location
LOC110489580 LOC106590592 coding downstream 700091 10775696 ~ 10796596 (-)
LOC110490906 LOC106578456 coding downstream 785552 10685921 ~ 10711135 (-)
LOC118938942 NA coding downstream 822142 10673749 ~ 10674545 (-)
LOC118938941 NA coding downstream 822942 10672950 ~ 10673745 (-)
LOC118938785 NA coding downstream 848524 10647873 ~ 10648163 (-)
LOC118938787 NA coding upstream 424289 12025555 ~ 12029416 (-)
LOC110489593 LOC106590549 coding upstream 906049 12507315 ~ 12533443 (-)
LOC118938943 NA coding upstream 1119535 12720801 ~ 12784079 (-)
LOC110489587 NA coding upstream 1161146 12762412 ~ 12769791 (-)
LOC110489601 LOC106590561 coding upstream 1551108 13152176 ~ 13163864 (-)
G1258073 NA non-coding downstream 1289 11494707 ~ 11495398 (-)
G1258059 NA non-coding downstream 16986 11478346 ~ 11479701 (-)
G1258058 NA non-coding downstream 18855 11475878 ~ 11477832 (-)
G1258055 NA non-coding downstream 28186 11468175 ~ 11468501 (-)
G1258053 NA non-coding downstream 31140 11465292 ~ 11465547 (-)
G1258148 NA non-coding upstream 47402 11648668 ~ 11652331 (-)
G1258169 NA non-coding upstream 69761 11671027 ~ 11671618 (-)
G1258179 NA non-coding upstream 81261 11682527 ~ 11684228 (-)
G1258200 NA non-coding upstream 107186 11708452 ~ 11708697 (-)
G1258205 NA non-coding upstream 118331 11719597 ~ 11719822 (-)
G1257642 NA other downstream 677776 10818443 ~ 10818911 (-)
LOC110489570 LOC106590600 other downstream 1200697 10256343 ~ 10296042 (-)
G1256654 NA other downstream 1621945 9873519 ~ 9874742 (-)
G1256146 NA other downstream 2017869 9477813 ~ 9478818 (-)
G1255735 NA other downstream 2472684 9023584 ~ 9024003 (-)
LOC110489604 mllt10 other upstream 1740787 13288725 ~ 13369504 (-)
G1260199 NA other upstream 1785123 13386389 ~ 13387587 (-)
G1260226 LOC106590529 other upstream 1861599 13462865 ~ 13505161 (-)
G1260265 NA other upstream 1935804 13537070 ~ 13538208 (-)

Expression


Co-expression Network