Gene
RNA
| Item | Value |
|---|---|
| gene id | G1259238 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048579.1 |
| NCBI id | CM023233.2 |
| chromosome length | 81569517 |
| location | 12738080 ~ 12738480 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU1438588 | True | 401 | lncRNA | 0.41 | 1 | 12738080 | 12738480 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110489593 | LOC106590549 | coding | downstream | 204637 | 12507315 ~ 12533443 (-) |
| LOC118938787 | NA | coding | downstream | 708664 | 12025555 ~ 12029416 (-) |
| LOC110489583 | LOC106590573 | coding | downstream | 1180609 | 11539629 ~ 11557471 (-) |
| ropn1l | ropn1l | coding | downstream | 1212468 | 11509626 ~ 11525612 (-) |
| LOC110490908 | LOC106590575 | coding | downstream | 1239631 | 11469774 ~ 11498449 (-) |
| LOC110489587 | NA | coding | upstream | 23932 | 12762412 ~ 12769791 (-) |
| LOC110489601 | LOC106590561 | coding | upstream | 413894 | 13152176 ~ 13163864 (-) |
| LOC110489602 | LOC106590560 | coding | upstream | 431868 | 13170348 ~ 13176530 (-) |
| LOC110490823 | NA | coding | upstream | 457245 | 13195725 ~ 13201088 (-) |
| LOC110490912 | spag6 | coding | upstream | 464725 | 13203205 ~ 13213651 (-) |
| G1259235 | NA | non-coding | downstream | 14042 | 12723746 ~ 12724038 (-) |
| G1259194 | NA | non-coding | downstream | 17348 | 12719005 ~ 12720732 (-) |
| G1259190 | NA | non-coding | downstream | 68367 | 12667796 ~ 12669713 (-) |
| G1259192 | NA | non-coding | downstream | 96570 | 12641009 ~ 12641510 (-) |
| G1259183 | NA | non-coding | downstream | 103777 | 12633603 ~ 12634303 (-) |
| G1259239 | NA | non-coding | upstream | 652 | 12739132 ~ 12739446 (-) |
| G1259240 | NA | non-coding | upstream | 1652 | 12740132 ~ 12740341 (-) |
| G1259256 | NA | non-coding | upstream | 22736 | 12761216 ~ 12761440 (-) |
| G1259529 | NA | non-coding | upstream | 75743 | 12814223 ~ 12918748 (-) |
| G1259545 | NA | non-coding | upstream | 103767 | 12842247 ~ 12843417 (-) |
| G1257642 | NA | other | downstream | 1919169 | 10818443 ~ 10818911 (-) |
| LOC110489570 | LOC106590600 | other | downstream | 2442090 | 10256343 ~ 10296042 (-) |
| G1256654 | NA | other | downstream | 2863338 | 9873519 ~ 9874742 (-) |
| G1256146 | NA | other | downstream | 3259262 | 9477813 ~ 9478818 (-) |
| LOC110489604 | mllt10 | other | upstream | 603573 | 13288725 ~ 13369504 (-) |
| G1260199 | NA | other | upstream | 647909 | 13386389 ~ 13387587 (-) |
| G1260226 | LOC106590529 | other | upstream | 724385 | 13462865 ~ 13505161 (-) |
| G1260265 | NA | other | upstream | 798590 | 13537070 ~ 13538208 (-) |
| msl2b | LOC106590518 | other | upstream | 969533 | 13708013 ~ 13716136 (-) |
