Gene
RNA
| Item | Value |
|---|---|
| gene id | G1259240 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048579.1 |
| NCBI id | CM023233.2 |
| chromosome length | 81569517 |
| location | 12740132 ~ 12740341 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU1438590 | True | 210 | lncRNA | 0.40 | 1 | 12740132 | 12740341 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110489593 | LOC106590549 | coding | downstream | 206689 | 12507315 ~ 12533443 (-) |
| LOC118938787 | NA | coding | downstream | 710716 | 12025555 ~ 12029416 (-) |
| LOC110489583 | LOC106590573 | coding | downstream | 1182661 | 11539629 ~ 11557471 (-) |
| ropn1l | ropn1l | coding | downstream | 1214520 | 11509626 ~ 11525612 (-) |
| LOC110490908 | LOC106590575 | coding | downstream | 1241683 | 11469774 ~ 11498449 (-) |
| LOC110489587 | NA | coding | upstream | 22071 | 12762412 ~ 12769791 (-) |
| LOC110489601 | LOC106590561 | coding | upstream | 412033 | 13152176 ~ 13163864 (-) |
| LOC110489602 | LOC106590560 | coding | upstream | 430007 | 13170348 ~ 13176530 (-) |
| LOC110490823 | NA | coding | upstream | 455384 | 13195725 ~ 13201088 (-) |
| LOC110490912 | spag6 | coding | upstream | 462864 | 13203205 ~ 13213651 (-) |
| G1259239 | NA | non-coding | downstream | 686 | 12739132 ~ 12739446 (-) |
| G1259238 | NA | non-coding | downstream | 1652 | 12738080 ~ 12738480 (-) |
| G1259235 | NA | non-coding | downstream | 16094 | 12723746 ~ 12724038 (-) |
| G1259194 | NA | non-coding | downstream | 19400 | 12719005 ~ 12720732 (-) |
| G1259190 | NA | non-coding | downstream | 70419 | 12667796 ~ 12669713 (-) |
| G1259256 | NA | non-coding | upstream | 20875 | 12761216 ~ 12761440 (-) |
| G1259529 | NA | non-coding | upstream | 73882 | 12814223 ~ 12918748 (-) |
| G1259545 | NA | non-coding | upstream | 101906 | 12842247 ~ 12843417 (-) |
| G1259602 | NA | non-coding | upstream | 214203 | 12954544 ~ 12957062 (-) |
| G1259607 | NA | non-coding | upstream | 227759 | 12968100 ~ 12969511 (-) |
| G1257642 | NA | other | downstream | 1921221 | 10818443 ~ 10818911 (-) |
| LOC110489570 | LOC106590600 | other | downstream | 2444142 | 10256343 ~ 10296042 (-) |
| G1256654 | NA | other | downstream | 2865390 | 9873519 ~ 9874742 (-) |
| G1256146 | NA | other | downstream | 3261314 | 9477813 ~ 9478818 (-) |
| LOC110489604 | mllt10 | other | upstream | 601712 | 13288725 ~ 13369504 (-) |
| G1260199 | NA | other | upstream | 646048 | 13386389 ~ 13387587 (-) |
| G1260226 | LOC106590529 | other | upstream | 722524 | 13462865 ~ 13505161 (-) |
| G1260265 | NA | other | upstream | 796729 | 13537070 ~ 13538208 (-) |
| msl2b | LOC106590518 | other | upstream | 967672 | 13708013 ~ 13716136 (-) |
