G1259545


Basic Information

Item Value
gene id G1259545
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048579.1
NCBI id CM023233.2
chromosome length 81569517
location 12842247 ~ 12843417 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1438950
ccctgatctgtttcacctatccttgtgattgtctccaacccCTCCAGGTTTCActgattttccccagtgtatttctccctgtgtttcctgtctctctgtaacagtgtatttatccctgtgtttcctgtctctctgtaccagtgtatttatccctgtgtttcctgtctctctgtaccagtgtatttatccctgtgtttcctgtctctctgtaccagtgtatttatccctgtgtttcctgtctctctgtaccagtgtatttatccctgtgtttcctgtctctctgtaccagtgtatttattcctgtgtttcctgtctctctgtaccagtgtatttatccctgtgtttcctgtctctctgtaccagtgtatttatccctgtgtttcctgtctctctgtaccagtgtatttatccctgtgtttcctgtctctctgtgccagtgtatttatccctgtgtttcctgtctctctgtaccagtgtatttctccctgtgtttcctgtctctctgtgccagtatatttctccctgtgtttcctgtctctctgtaccagtgtatttatccctgtgtttcctgtctctctgtgccagtgtatttctccctgtgtttcctgtctctctctgccagtgtatttctccctgtgtttcctgtctctctgtgccagtgtatttctccctgtgtttcctgtctctgtgccagttcatcttgtatgtttccaagtcaaccagcgtgtttttcccgttctcctgctttttgctattctcctttttctagtcctcccggttttgacgcttgcctgtttctgg

Function

NR:

description
PREDICTED: proline-rich protein 36-like

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1438950 True 801 lncRNA 0.45 3 12842247 12843417

Neighbor

gene id symbol gene type direction distance location
LOC118938943 NA coding downstream 58168 12720801 ~ 12784079 (-)
LOC110489587 NA coding downstream 72456 12762412 ~ 12769791 (-)
LOC110489593 LOC106590549 coding downstream 308804 12507315 ~ 12533443 (-)
LOC118938787 NA coding downstream 812831 12025555 ~ 12029416 (-)
LOC110489583 LOC106590573 coding downstream 1284776 11539629 ~ 11557471 (-)
LOC110489601 LOC106590561 coding upstream 308957 13152176 ~ 13163864 (-)
LOC110489602 LOC106590560 coding upstream 326931 13170348 ~ 13176530 (-)
LOC110490823 NA coding upstream 352308 13195725 ~ 13201088 (-)
LOC110490912 spag6 coding upstream 359788 13203205 ~ 13213651 (-)
LOC110489603 bmi1a coding upstream 375934 13219351 ~ 13227413 (-)
G1259256 NA non-coding downstream 80807 12761216 ~ 12761440 (-)
G1259240 NA non-coding downstream 101906 12740132 ~ 12740341 (-)
G1259239 NA non-coding downstream 102801 12739132 ~ 12739446 (-)
G1259238 NA non-coding downstream 103767 12738080 ~ 12738480 (-)
G1259235 NA non-coding downstream 118209 12723746 ~ 12724038 (-)
G1259602 NA non-coding upstream 111127 12954544 ~ 12957062 (-)
G1259607 NA non-coding upstream 124683 12968100 ~ 12969511 (-)
G1259620 NA non-coding upstream 179943 13023360 ~ 13023904 (-)
G1259643 NA non-coding upstream 212495 13055912 ~ 13080125 (-)
G1259648 NA non-coding upstream 217193 13060610 ~ 13115271 (-)
G1257642 NA other downstream 2023336 10818443 ~ 10818911 (-)
LOC110489570 LOC106590600 other downstream 2546257 10256343 ~ 10296042 (-)
G1256654 NA other downstream 2967505 9873519 ~ 9874742 (-)
G1256146 NA other downstream 3363429 9477813 ~ 9478818 (-)
LOC110489604 mllt10 other upstream 498636 13288725 ~ 13369504 (-)
G1260199 NA other upstream 542972 13386389 ~ 13387587 (-)
G1260226 LOC106590529 other upstream 619448 13462865 ~ 13505161 (-)
G1260265 NA other upstream 693653 13537070 ~ 13538208 (-)
msl2b LOC106590518 other upstream 864596 13708013 ~ 13716136 (-)

Expression


Co-expression Network