Gene
RNA
| Item | Value |
|---|---|
| gene id | G1259738 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048579.1 |
| NCBI id | CM023233.2 |
| chromosome length | 81569517 |
| location | 13259036 ~ 13259439 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU1439187 | True | 404 | lncRNA | 0.36 | 1 | 13259036 | 13259439 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110489600 | LOC106590541 | coding | upstream | 115013 | 13140028 ~ 13144023 (+) |
| LOC110515947 | LOC106578389 | coding | upstream | 136485 | 12835920 ~ 13122551 (+) |
| sec61g | NA | coding | upstream | 538295 | 12718578 ~ 12720741 (+) |
| LOC110489589 | LOC106590556 | coding | upstream | 589308 | 12645767 ~ 12669728 (+) |
| LOC110489591 | LOC106592044 | coding | upstream | 619480 | 12562131 ~ 12639556 (+) |
| LOC110489606 | skida1 | coding | downstream | 114642 | 13374081 ~ 13380357 (+) |
| armc3 | armc3 | coding | downstream | 199770 | 13459209 ~ 13480871 (+) |
| LOC100135934 | LOC106590529 | coding | downstream | 236896 | 13496335 ~ 13505165 (+) |
| LOC110489613 | LOC106590529 | coding | downstream | 255360 | 13514799 ~ 13517938 (+) |
| si:ch211-230g15.5 | LOC106590521 | coding | downstream | 273163 | 13532602 ~ 13551953 (+) |
| G1259731 | NA | non-coding | upstream | 12009 | 13246693 ~ 13247027 (+) |
| G1259478 | bmi1a | non-coding | upstream | 39213 | 13218363 ~ 13219823 (+) |
| G1259469 | NA | non-coding | upstream | 83177 | 13165171 ~ 13175859 (+) |
| G1259465 | ezh2 | non-coding | upstream | 97558 | 13158773 ~ 13161478 (+) |
| G1259460 | NA | non-coding | upstream | 108678 | 13148539 ~ 13150358 (+) |
| G1259783 | NA | non-coding | downstream | 142212 | 13401651 ~ 13405169 (+) |
| G1259784 | LOC106578380 | non-coding | downstream | 146843 | 13406282 ~ 13407325 (+) |
| G1259831 | NA | non-coding | downstream | 223243 | 13482682 ~ 13492227 (+) |
| G1259854 | NA | non-coding | downstream | 263577 | 13523016 ~ 13524334 (+) |
| G1259481 | NA | other | upstream | 74469 | 13184293 ~ 13184567 (+) |
| G1258375 | NA | other | upstream | 1353518 | 11905086 ~ 11905518 (+) |
| G1257945 | NA | other | upstream | 1795548 | 11461992 ~ 11463488 (+) |
| LOC110490824 | LOC106590516 | other | downstream | 487228 | 13746336 ~ 13758266 (+) |
| G1260013 | NA | other | downstream | 609876 | 13869315 ~ 13870230 (+) |
| G1260074 | NA | other | downstream | 702062 | 13961501 ~ 13961816 (+) |
| LOC110489635 | LOC106590481 | other | downstream | 950926 | 14186442 ~ 14217437 (+) |
