Item | Value |
---|---|
gene id | G1260226 |
gene name | LOC106590529 |
gene type | misc |
species | rainbow trout (Oncorhynchus mykiss) |
category of species | economic fish |
Item | Value |
---|---|
chromosome id | NC_048579.1 |
NCBI id | CM023233.2 |
chromosome length | 81569517 |
location | 13462865 ~ 13505161 (-) |
genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
description |
---|
prostaglandine D synthase |
RNA id | representative | length | rna type | GC content | exon number | start site | end site |
---|---|---|---|---|---|---|---|
TU1439856 | False | 284 | lncRNA | 0.48 | 2 | 13462865 | 13496741 |
TU1439858 | True | 813 | TUCP | 0.48 | 7 | 13462865 | 13505161 |
gene id | symbol | gene type | direction | distance | location |
---|---|---|---|---|---|
LOC110515851 | LOC106578380 | coding | downstream | 10819 | 13402093 ~ 13452046 (-) |
LOC118938788 | NA | coding | downstream | 61945 | 13399453 ~ 13400920 (-) |
LOC110489604 | mllt10 | coding | downstream | 93361 | 13288725 ~ 13369504 (-) |
commd3 | comd3 | coding | downstream | 229944 | 13228122 ~ 13232921 (-) |
LOC110489603 | bmi1a | coding | downstream | 235452 | 13219351 ~ 13227413 (-) |
zgc:194621 | LOC106590539 | coding | upstream | 21754 | 13518495 ~ 13528448 (-) |
LOC110490917 | LOC106590522 | coding | upstream | 60402 | 13557143 ~ 13566414 (-) |
rpl22l1 | LOC105022019 | coding | upstream | 76408 | 13573149 ~ 13576243 (-) |
eif5a | LOC106590523 | coding | upstream | 86443 | 13583184 ~ 13591943 (-) |
tnikb | LOC106578374 | coding | upstream | 96329 | 13593070 ~ 13657184 (-) |
G1260211 | NA | non-coding | downstream | 28646 | 13433460 ~ 13434219 (-) |
G1260209 | NA | non-coding | downstream | 39421 | 13423064 ~ 13423444 (-) |
G1260192 | NA | non-coding | downstream | 47976 | 13371195 ~ 13414889 (-) |
G1260207 | NA | non-coding | downstream | 56660 | 13405610 ~ 13406205 (-) |
G1260142 | NA | non-coding | downstream | 57840 | 13399457 ~ 13405025 (-) |
G1260254 | NA | non-coding | upstream | 28710 | 13525451 ~ 13525838 (-) |
G1260257 | NA | non-coding | upstream | 34637 | 13531378 ~ 13531615 (-) |
G1260258 | NA | non-coding | upstream | 36207 | 13532948 ~ 13533259 (-) |
G1260269 | NA | non-coding | upstream | 54431 | 13551172 ~ 13551776 (-) |
G1260199 | NA | other | downstream | 75278 | 13386389 ~ 13387587 (-) |
LOC110489593 | LOC106590549 | other | downstream | 929477 | 12507315 ~ 12533443 (-) |
G1257642 | NA | other | downstream | 2643954 | 10818443 ~ 10818911 (-) |
LOC110489570 | LOC106590600 | other | downstream | 3166875 | 10256343 ~ 10296042 (-) |
G1260265 | NA | other | upstream | 40329 | 13537070 ~ 13538208 (-) |
msl2b | LOC106590518 | other | upstream | 211272 | 13708013 ~ 13716136 (-) |
LOC110489642 | LOC106590491 | other | upstream | 836415 | 14324774 ~ 14335805 (-) |
LOC110489646 | LOC105021982 | other | upstream | 916087 | 14412828 ~ 14435607 (-) |
G1261237 | LOC106596271 | other | upstream | 963066 | 14459807 ~ 14478227 (-) |