G1259861


Basic Information

Item Value
gene id G1259861
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048579.1
NCBI id CM023233.2
chromosome length 81569517
location 13531374 ~ 13531617 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1439377
gtcacacctccatccctagtgcctggtcacacctccatccctagtgcctggtcacacctccatccctagtggtcacacctccatccctagtgcctggtcacacctccatccctagtgcctggtcacacctccatccctagtgcctggtcacacctccatccctagtgcctggtcacacctccatccctagtgcctggtcacacctccatccctagtgcctggtcacacctccatccctagtgct

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1439377 True 244 lncRNA 0.59 1 13531374 13531617

Neighbor

gene id symbol gene type direction distance location
LOC110489613 LOC106590529 coding upstream 13436 13514799 ~ 13517938 (+)
LOC100135934 LOC106590529 coding upstream 26209 13496335 ~ 13505165 (+)
armc3 armc3 coding upstream 50622 13459209 ~ 13480871 (+)
LOC110489606 skida1 coding upstream 151017 13374081 ~ 13380357 (+)
LOC110489600 LOC106590541 coding upstream 387351 13140028 ~ 13144023 (+)
si:ch211-230g15.5 LOC106590521 coding downstream 985 13532602 ~ 13551953 (+)
LOC110489618 LOC106590519 coding downstream 167660 13699277 ~ 13709450 (+)
LOC100135979 ck-2.1 coding downstream 190841 13722458 ~ 13725519 (+)
LOC118936270 LOC106590515 coding downstream 194662 13726279 ~ 13744753 (+)
LOC110490824 LOC106590516 coding downstream 214719 13746336 ~ 13758266 (+)
G1259854 NA non-coding upstream 7040 13523016 ~ 13524334 (+)
G1259831 NA non-coding upstream 39147 13482682 ~ 13492227 (+)
G1259784 LOC106578380 non-coding upstream 124049 13406282 ~ 13407325 (+)
G1259783 NA non-coding upstream 126205 13401651 ~ 13405169 (+)
G1259864 NA non-coding downstream 4207 13535824 ~ 13536234 (+)
G1259876 LOC105022019 non-coding downstream 41536 13573153 ~ 13576134 (+)
G1259875 LOC106590523 non-coding downstream 50952 13582569 ~ 13587128 (+)
G1259908 NA non-coding downstream 87086 13618703 ~ 13622599 (+)
G1259481 NA other upstream 346807 13184293 ~ 13184567 (+)
LOC110489589 LOC106590556 other upstream 867519 12645767 ~ 12669728 (+)
LOC110489591 LOC106592044 other upstream 891909 12562131 ~ 12639556 (+)
G1258375 NA other upstream 1625856 11905086 ~ 11905518 (+)
G1260013 NA other downstream 337698 13869315 ~ 13870230 (+)
G1260074 NA other downstream 429884 13961501 ~ 13961816 (+)
LOC110489635 LOC106590481 other downstream 678748 14186442 ~ 14217437 (+)
LOC110489644 NA other downstream 828480 14360048 ~ 14362944 (+)

Expression


Co-expression Network