G1259864


Basic Information

Item Value
gene id G1259864
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048579.1
NCBI id CM023233.2
chromosome length 81569517
location 13535824 ~ 13536234 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1439382
CTCTATTTCTACCAACTGATAGTGtgtaacaacacacacaccaacacctgtCAGCTCTACTTCTACCAACTGTAGTGtgtaacaacacacacaccaacacctgtCAGCTCTACTGCTACCAACTGATAGTgtgtaacaacacacacacaccaacacctgtCAGCTCTATTTCTACCAACTGATAGTGtgtaacaacacacacaccaacacctgtcagCTCTACTTCTACCAACTGATAGTGtgtaacaacacacacaccaacacctgtCAGCTCTACTTCTACCAACTGATAGTGtgtaacaacacacacaccaacacctgtCAGCT

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1439382 True 327 lncRNA 0.44 2 13535824 13536234

Neighbor

gene id symbol gene type direction distance location
LOC110489613 LOC106590529 coding upstream 17886 13514799 ~ 13517938 (+)
LOC100135934 LOC106590529 coding upstream 30659 13496335 ~ 13505165 (+)
armc3 armc3 coding upstream 55072 13459209 ~ 13480871 (+)
LOC110489606 skida1 coding upstream 155467 13374081 ~ 13380357 (+)
LOC110489600 LOC106590541 coding upstream 391801 13140028 ~ 13144023 (+)
LOC110489618 LOC106590519 coding downstream 163043 13699277 ~ 13709450 (+)
LOC100135979 ck-2.1 coding downstream 186224 13722458 ~ 13725519 (+)
LOC118936270 LOC106590515 coding downstream 190045 13726279 ~ 13744753 (+)
LOC110490824 LOC106590516 coding downstream 210102 13746336 ~ 13758266 (+)
LOC110489621 NA coding downstream 345427 13881661 ~ 13913203 (+)
G1259861 NA non-coding upstream 4207 13531374 ~ 13531617 (+)
G1259854 NA non-coding upstream 11490 13523016 ~ 13524334 (+)
G1259831 NA non-coding upstream 43597 13482682 ~ 13492227 (+)
G1259784 LOC106578380 non-coding upstream 128499 13406282 ~ 13407325 (+)
si:ch211-230g15.5 LOC106590521 non-coding downstream 3731 13532602 ~ 13551953 (+)
G1259876 LOC105022019 non-coding downstream 36919 13573153 ~ 13576134 (+)
G1259875 LOC106590523 non-coding downstream 46335 13582569 ~ 13587128 (+)
G1259908 NA non-coding downstream 82469 13618703 ~ 13622599 (+)
G1259931 NA non-coding downstream 131898 13668132 ~ 13668348 (+)
G1259481 NA other upstream 351257 13184293 ~ 13184567 (+)
LOC110489589 LOC106590556 other upstream 871969 12645767 ~ 12669728 (+)
LOC110489591 LOC106592044 other upstream 896359 12562131 ~ 12639556 (+)
G1258375 NA other upstream 1630306 11905086 ~ 11905518 (+)
G1260013 NA other downstream 333081 13869315 ~ 13870230 (+)
G1260074 NA other downstream 425267 13961501 ~ 13961816 (+)
LOC110489635 LOC106590481 other downstream 674131 14186442 ~ 14217437 (+)
LOC110489644 NA other downstream 823863 14360048 ~ 14362944 (+)

Expression


Co-expression Network