G1259908


Basic Information

Item Value
gene id G1259908
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048579.1
NCBI id CM023233.2
chromosome length 81569517
location 13618703 ~ 13622599 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1439439
ggtaatacagtagggggaggtgcagcgtgaggtaatacagtggggggaggtgcagcgtgaggtaatacagtggcgggaggttcagcgtgaggtaatacagtggggggaggaaatacagtagggggaggtgcagcgtgaggtaatacagtgagGGGAgtgtgcagcgtgaggtaatacagtggggggagtgtgcagcgtgaggtaatacagtagggggaggtgcagcatgaggtaatacagtggggggaggtgcagcgtgaggtaaaaCAGTAGGAGGAgtgtgcagcgtgaggtaatacagttggGGGAgtgtgcagcgtgaggtaatacagtggggggaggtgc

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1439439 True 345 lncRNA 0.57 2 13618703 13622599

Neighbor

gene id symbol gene type direction distance location
si:ch211-230g15.5 LOC106590521 coding upstream 66750 13532602 ~ 13551953 (+)
LOC110489613 LOC106590529 coding upstream 100765 13514799 ~ 13517938 (+)
LOC100135934 LOC106590529 coding upstream 113538 13496335 ~ 13505165 (+)
armc3 armc3 coding upstream 137951 13459209 ~ 13480871 (+)
LOC110489606 skida1 coding upstream 238346 13374081 ~ 13380357 (+)
LOC110489618 LOC106590519 coding downstream 76678 13699277 ~ 13709450 (+)
LOC100135979 ck-2.1 coding downstream 99859 13722458 ~ 13725519 (+)
LOC118936270 LOC106590515 coding downstream 103680 13726279 ~ 13744753 (+)
LOC110490824 LOC106590516 coding downstream 123737 13746336 ~ 13758266 (+)
LOC110489621 NA coding downstream 259062 13881661 ~ 13913203 (+)
G1259875 LOC106590523 non-coding upstream 31575 13582569 ~ 13587128 (+)
G1259876 LOC105022019 non-coding upstream 42569 13573153 ~ 13576134 (+)
G1259864 NA non-coding upstream 82469 13535824 ~ 13536234 (+)
G1259861 NA non-coding upstream 87086 13531374 ~ 13531617 (+)
G1259931 NA non-coding downstream 45533 13668132 ~ 13668348 (+)
G1259980 LOC107549743 non-coding downstream 178200 13800799 ~ 13824401 (+)
G1260029 NA non-coding downstream 221132 13843731 ~ 13844636 (+)
G1260030 NA non-coding downstream 224649 13847248 ~ 13847863 (+)
G1260031 NA non-coding downstream 229517 13852116 ~ 13852416 (+)
G1259481 NA other upstream 434136 13184293 ~ 13184567 (+)
LOC110489589 LOC106590556 other upstream 954848 12645767 ~ 12669728 (+)
LOC110489591 LOC106592044 other upstream 979238 12562131 ~ 12639556 (+)
G1258375 NA other upstream 1713185 11905086 ~ 11905518 (+)
G1260013 NA other downstream 246716 13869315 ~ 13870230 (+)
G1260074 NA other downstream 338902 13961501 ~ 13961816 (+)
LOC110489635 LOC106590481 other downstream 587766 14186442 ~ 14217437 (+)
LOC110489644 NA other downstream 737498 14360048 ~ 14362944 (+)

Expression


Co-expression Network