G1260031


Basic Information

Item Value
gene id G1260031
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048579.1
NCBI id CM023233.2
chromosome length 81569517
location 13852116 ~ 13852416 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1439596
CaaaaagctgtgtgtgtgagtaaagAGCTTCAGTGACAGTACTGTACCAGGTGTTGACGCTCCAGACCGAGGTGGTGTGACCACGTCTCCCGCGTTAGCAGCACCGGAGGCTCAGCTGGGACAGCCGACTCCTGGTCTGACGTCATGTGACGTCTGAACTCCTCTCAGGGATGTGTGCTGCTGCTCAACAGGGAAGCTGGTTGGGGGAtatatctaaactcagcaaaaaaataaacatccattTTTCAGCACCctatctttcaaagataattcgtaaaaatccaaataacttcacagatct

Function

NR:

description
la-related protein 4B-like

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1439596 True 301 lncRNA 0.48 1 13852116 13852416

Neighbor

gene id symbol gene type direction distance location
LOC110490824 LOC106590516 coding upstream 93850 13746336 ~ 13758266 (+)
LOC118936270 LOC106590515 coding upstream 107363 13726279 ~ 13744753 (+)
LOC100135979 ck-2.1 coding upstream 126597 13722458 ~ 13725519 (+)
LOC110489618 LOC106590519 coding upstream 142666 13699277 ~ 13709450 (+)
si:ch211-230g15.5 LOC106590521 coding upstream 300163 13532602 ~ 13551953 (+)
LOC110489621 NA coding downstream 29245 13881661 ~ 13913203 (+)
LOC110489622 LOC106596459 coding downstream 79248 13931664 ~ 13948329 (+)
LOC118938945 NA coding downstream 106626 13959042 ~ 13960551 (+)
LOC110490921 LOC106590500 coding downstream 135940 13988356 ~ 13999764 (+)
LOC110489629 LOC106590463 coding downstream 200610 14053026 ~ 14057431 (+)
G1260030 NA non-coding upstream 4253 13847248 ~ 13847863 (+)
G1260029 NA non-coding upstream 7480 13843731 ~ 13844636 (+)
G1259980 LOC107549743 non-coding upstream 27715 13800799 ~ 13824401 (+)
G1259931 NA non-coding upstream 183768 13668132 ~ 13668348 (+)
G1259908 NA non-coding upstream 229517 13618703 ~ 13622599 (+)
G1260035 NA non-coding downstream 3548 13855964 ~ 13856231 (+)
G1260036 NA non-coding downstream 4033 13856449 ~ 13856730 (+)
G1260039 NA non-coding downstream 6472 13858888 ~ 13859144 (+)
G1260040 NA non-coding downstream 8040 13860456 ~ 13860761 (+)
G1260041 NA non-coding downstream 9707 13862123 ~ 13863067 (+)
armc3 armc3 other upstream 371245 13459209 ~ 13480871 (+)
G1259481 NA other upstream 667549 13184293 ~ 13184567 (+)
LOC110489589 LOC106590556 other upstream 1188261 12645767 ~ 12669728 (+)
LOC110489591 LOC106592044 other upstream 1212651 12562131 ~ 12639556 (+)
G1260013 NA other downstream 16899 13869315 ~ 13870230 (+)
G1260074 NA other downstream 109085 13961501 ~ 13961816 (+)
LOC110489635 LOC106590481 other downstream 357949 14186442 ~ 14217437 (+)
LOC110489644 NA other downstream 507681 14360048 ~ 14362944 (+)
G1260745 NA other downstream 814243 14666659 ~ 14668539 (+)

Expression


Co-expression Network