G1260035


Basic Information

Item Value
gene id G1260035
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048579.1
NCBI id CM023233.2
chromosome length 81569517
location 13855964 ~ 13856231 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1439600
gctattgatgtaaaagattaccaggtctttaagagtttattcggaagatagcagctctataaacattctttcgtggtgccccgactttctagttaattatttacatgattagcttaatcaggtaatattaattacagagaaattattttatagaatagcatgtcatatcacttaatccggcatagccaaataCACAACATGTGTGTAGAATcaatacagtaccaatcaaaagtttggacacacctactcattcaagggtttttcttat

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1439600 True 268 lncRNA 0.33 1 13855964 13856231

Neighbor

gene id symbol gene type direction distance location
LOC110490824 LOC106590516 coding upstream 97698 13746336 ~ 13758266 (+)
LOC118936270 LOC106590515 coding upstream 111211 13726279 ~ 13744753 (+)
LOC100135979 ck-2.1 coding upstream 130445 13722458 ~ 13725519 (+)
LOC110489618 LOC106590519 coding upstream 146514 13699277 ~ 13709450 (+)
si:ch211-230g15.5 LOC106590521 coding upstream 304011 13532602 ~ 13551953 (+)
LOC110489621 NA coding downstream 25430 13881661 ~ 13913203 (+)
LOC110489622 LOC106596459 coding downstream 75433 13931664 ~ 13948329 (+)
LOC118938945 NA coding downstream 102811 13959042 ~ 13960551 (+)
LOC110490921 LOC106590500 coding downstream 132125 13988356 ~ 13999764 (+)
LOC110489629 LOC106590463 coding downstream 196795 14053026 ~ 14057431 (+)
G1260031 NA non-coding upstream 3548 13852116 ~ 13852416 (+)
G1260030 NA non-coding upstream 8101 13847248 ~ 13847863 (+)
G1260029 NA non-coding upstream 11328 13843731 ~ 13844636 (+)
G1259980 LOC107549743 non-coding upstream 31563 13800799 ~ 13824401 (+)
G1259931 NA non-coding upstream 187616 13668132 ~ 13668348 (+)
G1260036 NA non-coding downstream 218 13856449 ~ 13856730 (+)
G1260039 NA non-coding downstream 2657 13858888 ~ 13859144 (+)
G1260040 NA non-coding downstream 4225 13860456 ~ 13860761 (+)
G1260041 NA non-coding downstream 5892 13862123 ~ 13863067 (+)
G1260042 NA non-coding downstream 7384 13863615 ~ 13863967 (+)
armc3 armc3 other upstream 375093 13459209 ~ 13480871 (+)
G1259481 NA other upstream 671397 13184293 ~ 13184567 (+)
LOC110489589 LOC106590556 other upstream 1192109 12645767 ~ 12669728 (+)
LOC110489591 LOC106592044 other upstream 1216499 12562131 ~ 12639556 (+)
G1260013 NA other downstream 13084 13869315 ~ 13870230 (+)
G1260074 NA other downstream 105270 13961501 ~ 13961816 (+)
LOC110489635 LOC106590481 other downstream 354134 14186442 ~ 14217437 (+)
LOC110489644 NA other downstream 503866 14360048 ~ 14362944 (+)
G1260745 NA other downstream 810428 14666659 ~ 14668539 (+)

Expression


Co-expression Network