G1260895


Basic Information

Item Value
gene id G1260895
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048579.1
NCBI id CM023233.2
chromosome length 81569517
location 14909147 ~ 14909944 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1440683
gagtacatgtaggtaggggtaaagtgactatgcatagataataaacagcgagtacatgtaggtaggggtaaagtgactatgcatagataataaacagcgagtacatgtaggtaggggtaaagtgactatgcatagataataaacagtgagtacatgtaggtaggggtaaagtgactatgcatagataataaacagtgagtacatgtaggtaggggtaaagtgactatgcatagataataaacagtgagtacatgtaggtaggggtaaagtgactatgcatagataataaacagtgagtacatgtaggtaggggtaaagtgactatgcatagataataaacagtgagtacatgtaggtaggggtaaagtgactatgcatagataataaacagtgagtacatgtaggtaggggtaaagtgactatgcatagataataaacagtgagtacatgtaggtaggggtaaagtgactatgcatagataataaacagtgagtacatgtaggt

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1440683 True 504 lncRNA 0.37 2 14909147 14909944

Neighbor

gene id symbol gene type direction distance location
LOC110489674 LOC106590469 coding upstream 100981 14796848 ~ 14808166 (+)
LOC110489676 LOC106590472 coding upstream 112800 14780843 ~ 14796347 (+)
LOC110489651 ccdc191 coding upstream 178057 14692257 ~ 14731090 (+)
LOC110490825 LOC106590468 coding upstream 296503 14577442 ~ 14612644 (+)
si:ch211-161h7.8 kat coding upstream 345407 14553835 ~ 14563740 (+)
LOC110489671 LOC100195752 coding downstream 114873 15024817 ~ 15049542 (+)
LOC110489669 LOC106590445 coding downstream 140341 15050285 ~ 15075129 (+)
rl21 rpl21 coding downstream 186321 15096265 ~ 15098694 (+)
gtf3ab LOC106590449 coding downstream 196073 15106017 ~ 15108849 (+)
LOC110489665 NA coding downstream 227379 15137323 ~ 15140777 (+)
G1260843 NA non-coding upstream 93323 14815492 ~ 14815824 (+)
G1260842 LOC106590470 non-coding upstream 93722 14815168 ~ 14815425 (+)
G1260818 NA non-coding upstream 149590 14758931 ~ 14759557 (+)
G1260805 LOC106590473 non-coding upstream 162739 14744654 ~ 14746408 (+)
G1260772 NA non-coding upstream 176819 14732190 ~ 14732328 (+)
G1260898 NA non-coding downstream 10698 14920642 ~ 14921901 (+)
G1260903 NA non-coding downstream 22407 14932351 ~ 14932614 (+)
G1260909 NA non-coding downstream 31325 14941269 ~ 14963712 (+)
G1260912 LOC106590443 non-coding downstream 34735 14944679 ~ 14953423 (+)
G1260973 NA non-coding downstream 163868 15073812 ~ 15074521 (+)
G1260745 NA other upstream 240608 14666659 ~ 14668539 (+)
LOC110489644 NA other upstream 546207 14360048 ~ 14362944 (+)
LOC110489635 LOC106590481 other upstream 693218 14186442 ~ 14217437 (+)
G1260074 NA other upstream 947331 13961501 ~ 13961816 (+)
G1260013 NA other upstream 1038917 13869315 ~ 13870230 (+)
G1260946 LOC106590444 other downstream 111048 15020992 ~ 15022053 (+)
LOC110489660 pan3 other downstream 283068 15166247 ~ 15194945 (+)
LOC110489686 LOC106590396 other downstream 786981 15696896 ~ 15706601 (+)
G1261980 NA other downstream 825986 15735930 ~ 15736417 (+)
mcmdc2 mcmdc2 other downstream 983024 15885437 ~ 15895996 (+)

Expression


Co-expression Network