Gene
RNA
| Item | Value |
|---|---|
| gene id | G1261569 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048579.1 |
| NCBI id | CM023233.2 |
| chromosome length | 81569517 |
| location | 15090789 ~ 15091010 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU1441505 | True | 222 | lncRNA | 0.30 | 1 | 15090789 | 15091010 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110489670 | LOC106590446 | coding | downstream | 2580 | 15080785 ~ 15088209 (-) |
| LOC110490926 | LOC106590444 | coding | downstream | 66413 | 14937736 ~ 15024376 (-) |
| LOC110490927 | LOC106590443 | coding | downstream | 72900 | 14920400 ~ 15017889 (-) |
| LOC110489675 | LOC106590470 | coding | downstream | 232448 | 14808367 ~ 14858341 (-) |
| LOC110489677 | LOC106579446 | coding | downstream | 311085 | 14760625 ~ 14779704 (-) |
| LOC110489668 | LOC106590448 | coding | upstream | 751 | 15091761 ~ 15096036 (-) |
| LOC110489663 | LOC106590447 | coding | upstream | 17844 | 15108854 ~ 15137066 (-) |
| flt3 | LOC106590453 | coding | upstream | 59991 | 15151001 ~ 15161411 (-) |
| LOC110489662 | LOC106579544 | coding | upstream | 104230 | 15195240 ~ 15270906 (-) |
| LOC110489659 | LOC106590434 | coding | upstream | 193361 | 15284371 ~ 15319070 (-) |
| G1261562 | NA | non-coding | downstream | 10044 | 15077710 ~ 15080745 (-) |
| G1261533 | NA | non-coding | downstream | 48163 | 15041316 ~ 15042626 (-) |
| G1261527 | NA | non-coding | downstream | 56466 | 15033781 ~ 15034323 (-) |
| G1261529 | rpl21 | non-coding | upstream | 5270 | 15096280 ~ 15098716 (-) |
| G1261583 | NA | non-coding | upstream | 71536 | 15162546 ~ 15162748 (-) |
| G1261601 | NA | non-coding | upstream | 98071 | 15189081 ~ 15189451 (-) |
| G1261603 | NA | non-coding | upstream | 98885 | 15189895 ~ 15190370 (-) |
| G1261604 | NA | non-coding | upstream | 99460 | 15190470 ~ 15190707 (-) |
| qtrt2 | qtrt2 | other | downstream | 408897 | 14666658 ~ 14692839 (-) |
| LOC110489648 | sh3k1 | other | downstream | 545313 | 14508427 ~ 14545697 (-) |
| G1261237 | LOC106596271 | other | downstream | 612562 | 14459807 ~ 14478227 (-) |
| LOC110489646 | LOC105021982 | other | downstream | 655203 | 14412828 ~ 14435607 (-) |
| G1261602 | NA | other | upstream | 98536 | 15189546 ~ 15189816 (-) |
| G1261796 | NA | other | upstream | 414688 | 15505698 ~ 15506198 (-) |
| G1262503 | NA | other | upstream | 715240 | 15806250 ~ 15807617 (-) |
| LOC110489690 | LOC106590399 | other | upstream | 737341 | 15821701 ~ 15845199 (-) |
