Gene
RNA
| Item | Value |
|---|---|
| gene id | G1260998 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048579.1 |
| NCBI id | CM023233.2 |
| chromosome length | 81569517 |
| location | 15141352 ~ 15141897 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU1440803 | True | 546 | lncRNA | 0.44 | 1 | 15141352 | 15141897 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110489665 | NA | coding | upstream | 575 | 15137323 ~ 15140777 (+) |
| gtf3ab | LOC106590449 | coding | upstream | 32503 | 15106017 ~ 15108849 (+) |
| rl21 | rpl21 | coding | upstream | 42658 | 15096265 ~ 15098694 (+) |
| LOC110489669 | LOC106590445 | coding | upstream | 66223 | 15050285 ~ 15075129 (+) |
| LOC110489671 | LOC100195752 | coding | upstream | 91810 | 15024817 ~ 15049542 (+) |
| LOC110489664 | LOC106590452 | coding | downstream | 1088 | 15142902 ~ 15147834 (+) |
| LOC110489660 | pan3 | coding | downstream | 24350 | 15166247 ~ 15194945 (+) |
| LOC110489655 | LOC106590438 | coding | downstream | 203583 | 15345480 ~ 15365760 (+) |
| LOC110489682 | LOC106590392 | coding | downstream | 390573 | 15532470 ~ 15534780 (+) |
| LOC110489686 | LOC106590396 | coding | downstream | 554999 | 15696896 ~ 15706601 (+) |
| G1260978 | NA | non-coding | upstream | 37298 | 15103829 ~ 15104054 (+) |
| G1260954 | NA | non-coding | upstream | 61161 | 15079882 ~ 15080191 (+) |
| G1260973 | NA | non-coding | upstream | 66831 | 15073812 ~ 15074521 (+) |
| G1260909 | NA | non-coding | upstream | 177640 | 14941269 ~ 14963712 (+) |
| G1261007 | LOC106590453 | non-coding | downstream | 12913 | 15154810 ~ 15155232 (+) |
| G1261012 | NA | non-coding | downstream | 19662 | 15161559 ~ 15161883 (+) |
| G1261056 | NA | non-coding | downstream | 130502 | 15272399 ~ 15272715 (+) |
| G1260946 | LOC106590444 | other | upstream | 119299 | 15020992 ~ 15022053 (+) |
| LOC110489673 | LOC106590441 | other | upstream | 227229 | 14905377 ~ 14914892 (+) |
| G1260745 | NA | other | upstream | 472813 | 14666659 ~ 14668539 (+) |
| LOC110489644 | NA | other | upstream | 778412 | 14360048 ~ 14362944 (+) |
| LOC110489635 | LOC106590481 | other | upstream | 925423 | 14186442 ~ 14217437 (+) |
| G1261980 | NA | other | downstream | 594033 | 15735930 ~ 15736417 (+) |
| mcmdc2 | mcmdc2 | other | downstream | 751071 | 15885437 ~ 15895996 (+) |
| LOC110489737 | LOC106590377 | other | downstream | 3718214 | 18859697 ~ 18866106 (+) |
