Gene
RNA
| Item | Value |
|---|---|
| gene id | G1261628 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048579.1 |
| NCBI id | CM023233.2 |
| chromosome length | 81569517 |
| location | 15274489 ~ 15274807 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| description |
|---|
| PREDICTED: proline-rich extensin-like protein EPR1 |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU1441565 | True | 319 | lncRNA | 0.34 | 1 | 15274489 | 15274807 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110489662 | LOC106579544 | coding | downstream | 3583 | 15195240 ~ 15270906 (-) |
| flt3 | LOC106590453 | coding | downstream | 113078 | 15151001 ~ 15161411 (-) |
| LOC110489663 | LOC106590447 | coding | downstream | 137423 | 15108854 ~ 15137066 (-) |
| LOC110489668 | LOC106590448 | coding | downstream | 178453 | 15091761 ~ 15096036 (-) |
| LOC110489670 | LOC106590446 | coding | downstream | 186280 | 15080785 ~ 15088209 (-) |
| LOC110489659 | LOC106590434 | coding | upstream | 9564 | 15284371 ~ 15319070 (-) |
| c1qtnf9 | LOC106590436 | coding | upstream | 44719 | 15319526 ~ 15322520 (-) |
| LOC110489657 | LOC106590437 | coding | upstream | 52362 | 15327169 ~ 15330900 (-) |
| LOC110489656 | abhd10 | coding | upstream | 61140 | 15334691 ~ 15521397 (-) |
| LOC110489683 | LOC106590393 | coding | upstream | 397230 | 15672037 ~ 15696647 (-) |
| G1261615 | NA | non-coding | downstream | 28761 | 15241405 ~ 15245728 (-) |
| G1261605 | NA | non-coding | downstream | 50333 | 15199102 ~ 15224156 (-) |
| G1261604 | NA | non-coding | downstream | 83782 | 15190470 ~ 15190707 (-) |
| G1261603 | NA | non-coding | downstream | 84119 | 15189895 ~ 15190370 (-) |
| G1261601 | NA | non-coding | downstream | 85038 | 15189081 ~ 15189451 (-) |
| G1261629 | NA | non-coding | upstream | 688 | 15275495 ~ 15275801 (-) |
| G1261657 | NA | non-coding | upstream | 59008 | 15333815 ~ 15348445 (-) |
| G1261672 | NA | non-coding | upstream | 88668 | 15363475 ~ 15365157 (-) |
| G1261674 | NA | non-coding | upstream | 91339 | 15366146 ~ 15366400 (-) |
| G1261602 | NA | other | downstream | 84673 | 15189546 ~ 15189816 (-) |
| G1261529 | rpl21 | other | downstream | 175773 | 15096280 ~ 15098716 (-) |
| G1261562 | NA | other | downstream | 195137 | 15077710 ~ 15080745 (-) |
| qtrt2 | qtrt2 | other | downstream | 592597 | 14666658 ~ 14692839 (-) |
| LOC110489648 | sh3k1 | other | downstream | 729013 | 14508427 ~ 14545697 (-) |
| G1261796 | NA | other | upstream | 230891 | 15505698 ~ 15506198 (-) |
| G1262503 | NA | other | upstream | 531443 | 15806250 ~ 15807617 (-) |
| LOC110489690 | LOC106590399 | other | upstream | 553544 | 15821701 ~ 15845199 (-) |
| LOC110490929 | LOC106590401 | other | upstream | 714479 | 15938237 ~ 16035283 (-) |
| G1262745 | NA | other | upstream | 1001202 | 16276009 ~ 16276552 (-) |
