Gene
RNA
| Item | Value |
|---|---|
| gene id | G1261132 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048579.1 |
| NCBI id | CM023233.2 |
| chromosome length | 81569517 |
| location | 15390362 ~ 15390584 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU1440972 | True | 223 | lncRNA | 0.54 | 1 | 15390362 | 15390584 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110489655 | LOC106590438 | coding | upstream | 24602 | 15345480 ~ 15365760 (+) |
| LOC110489660 | pan3 | coding | upstream | 197312 | 15166247 ~ 15194945 (+) |
| LOC110489664 | LOC106590452 | coding | upstream | 242528 | 15142902 ~ 15147834 (+) |
| LOC110489665 | NA | coding | upstream | 249585 | 15137323 ~ 15140777 (+) |
| gtf3ab | LOC106590449 | coding | upstream | 281513 | 15106017 ~ 15108849 (+) |
| LOC110489682 | LOC106590392 | coding | downstream | 141886 | 15532470 ~ 15534780 (+) |
| LOC110489686 | LOC106590396 | coding | downstream | 306312 | 15696896 ~ 15706601 (+) |
| LOC110490928 | dnjc5 | coding | downstream | 349440 | 15740024 ~ 15747900 (+) |
| LOC110489687 | LOC106590397 | coding | downstream | 360205 | 15750789 ~ 15759102 (+) |
| LOC110489688 | rrs1 | coding | downstream | 415634 | 15806218 ~ 15807665 (+) |
| G1261128 | NA | non-coding | upstream | 2588 | 15387456 ~ 15387774 (+) |
| G1261125 | NA | non-coding | upstream | 7386 | 15382681 ~ 15382976 (+) |
| G1261124 | NA | non-coding | upstream | 7697 | 15382453 ~ 15382665 (+) |
| G1261123 | NA | non-coding | upstream | 8081 | 15382080 ~ 15382281 (+) |
| G1261122 | NA | non-coding | upstream | 8482 | 15381668 ~ 15381880 (+) |
| G1261134 | NA | non-coding | downstream | 2233 | 15392817 ~ 15393043 (+) |
| G1261692 | NA | non-coding | downstream | 10744 | 15401328 ~ 15401527 (+) |
| G1261696 | NA | non-coding | downstream | 13200 | 15403784 ~ 15404023 (+) |
| G1261713 | NA | non-coding | downstream | 36579 | 15427163 ~ 15427902 (+) |
| G1261729 | NA | non-coding | downstream | 69496 | 15460080 ~ 15474988 (+) |
| G1260946 | LOC106590444 | other | upstream | 368309 | 15020992 ~ 15022053 (+) |
| LOC110489673 | LOC106590441 | other | upstream | 476239 | 14905377 ~ 14914892 (+) |
| G1260745 | NA | other | upstream | 721823 | 14666659 ~ 14668539 (+) |
| LOC110489644 | NA | other | upstream | 1027422 | 14360048 ~ 14362944 (+) |
| G1261980 | NA | other | downstream | 345346 | 15735930 ~ 15736417 (+) |
| mcmdc2 | mcmdc2 | other | downstream | 502384 | 15885437 ~ 15895996 (+) |
| LOC110489737 | LOC106590377 | other | downstream | 3469527 | 18859697 ~ 18866106 (+) |
| epb41l3a | LOC106590342 | other | downstream | 4283529 | 19598284 ~ 19680110 (+) |
