G1261134


Basic Information

Item Value
gene id G1261134
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048579.1
NCBI id CM023233.2
chromosome length 81569517
location 15392817 ~ 15393043 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1440974
TACCTGGTGTGAATCCAGGCGTCATTACAGTACCTGGTGTGAATCCAGGCGTCATTACAGTACCTGGTGTGAATCCAGGCGTCATTACGGTATCTGGTGTGAATCCAGGCGTCATTACAGTACCTGGTGTGAATCCAGGCGTCATTACGGTACCTGGTGTGAATCCAGGCGTCATTACAGTACCTGGTGTGAATCCAGGCGTCATTACAGTACCTGGTGTGAATCCA

Function

NR:

description
PREDICTED: signal-induced proliferation-associated 1-like protein 3 isoform X4

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1440974 True 227 lncRNA 0.50 1 15392817 15393043

Neighbor

gene id symbol gene type direction distance location
LOC110489655 LOC106590438 coding upstream 27057 15345480 ~ 15365760 (+)
LOC110489660 pan3 coding upstream 199767 15166247 ~ 15194945 (+)
LOC110489664 LOC106590452 coding upstream 244983 15142902 ~ 15147834 (+)
LOC110489665 NA coding upstream 252040 15137323 ~ 15140777 (+)
gtf3ab LOC106590449 coding upstream 283968 15106017 ~ 15108849 (+)
LOC110489682 LOC106590392 coding downstream 139427 15532470 ~ 15534780 (+)
LOC110489686 LOC106590396 coding downstream 303853 15696896 ~ 15706601 (+)
LOC110490928 dnjc5 coding downstream 346981 15740024 ~ 15747900 (+)
LOC110489687 LOC106590397 coding downstream 357746 15750789 ~ 15759102 (+)
LOC110489688 rrs1 coding downstream 413175 15806218 ~ 15807665 (+)
G1261132 NA non-coding upstream 2233 15390362 ~ 15390584 (+)
G1261128 NA non-coding upstream 5043 15387456 ~ 15387774 (+)
G1261125 NA non-coding upstream 9841 15382681 ~ 15382976 (+)
G1261124 NA non-coding upstream 10152 15382453 ~ 15382665 (+)
G1261123 NA non-coding upstream 10536 15382080 ~ 15382281 (+)
G1261692 NA non-coding downstream 8285 15401328 ~ 15401527 (+)
G1261696 NA non-coding downstream 10741 15403784 ~ 15404023 (+)
G1261713 NA non-coding downstream 34120 15427163 ~ 15427902 (+)
G1261729 NA non-coding downstream 67037 15460080 ~ 15474988 (+)
G1261783 NA non-coding downstream 97039 15490082 ~ 15490292 (+)
G1260946 LOC106590444 other upstream 370764 15020992 ~ 15022053 (+)
LOC110489673 LOC106590441 other upstream 478694 14905377 ~ 14914892 (+)
G1260745 NA other upstream 724278 14666659 ~ 14668539 (+)
LOC110489644 NA other upstream 1029877 14360048 ~ 14362944 (+)
G1261980 NA other downstream 342887 15735930 ~ 15736417 (+)
mcmdc2 mcmdc2 other downstream 499925 15885437 ~ 15895996 (+)
LOC110489737 LOC106590377 other downstream 3467068 18859697 ~ 18866106 (+)
epb41l3a LOC106590342 other downstream 4281070 19598284 ~ 19680110 (+)

Expression


Co-expression Network