G1261692


Basic Information

Item Value
gene id G1261692
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048579.1
NCBI id CM023233.2
chromosome length 81569517
location 15401328 ~ 15401527 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1441644
AAATAATAGAGTATGTATTTAGAAGCATACACATAACCTTTCACTGTTGTCAAATGAAATGAATGGTTGGGGAACAGTACAAATTGCAGGTAGAGTCCCCTCCCAGTTAGAAGCTTCCAGTTCTCAGATGAAGACGTGTGCTGGTCGTTGTGTAAACAAAGATAGATACTGCATCATCATTGCTATGGCAGGTGTTTGAT

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1441644 True 200 lncRNA 0.40 1 15401328 15401527

Neighbor

gene id symbol gene type direction distance location
LOC110489655 LOC106590438 coding upstream 35568 15345480 ~ 15365760 (+)
LOC110489660 pan3 coding upstream 208278 15166247 ~ 15194945 (+)
LOC110489664 LOC106590452 coding upstream 253494 15142902 ~ 15147834 (+)
LOC110489665 NA coding upstream 260551 15137323 ~ 15140777 (+)
gtf3ab LOC106590449 coding upstream 292479 15106017 ~ 15108849 (+)
LOC110489682 LOC106590392 coding downstream 130943 15532470 ~ 15534780 (+)
LOC110489686 LOC106590396 coding downstream 295369 15696896 ~ 15706601 (+)
LOC110490928 dnjc5 coding downstream 338497 15740024 ~ 15747900 (+)
LOC110489687 LOC106590397 coding downstream 349262 15750789 ~ 15759102 (+)
LOC110489688 rrs1 coding downstream 404691 15806218 ~ 15807665 (+)
G1261134 NA non-coding upstream 8285 15392817 ~ 15393043 (+)
G1261132 NA non-coding upstream 10744 15390362 ~ 15390584 (+)
G1261128 NA non-coding upstream 13554 15387456 ~ 15387774 (+)
G1261125 NA non-coding upstream 18352 15382681 ~ 15382976 (+)
G1261124 NA non-coding upstream 18663 15382453 ~ 15382665 (+)
G1261696 NA non-coding downstream 2257 15403784 ~ 15404023 (+)
G1261713 NA non-coding downstream 25636 15427163 ~ 15427902 (+)
G1261729 NA non-coding downstream 58553 15460080 ~ 15474988 (+)
G1261783 NA non-coding downstream 88555 15490082 ~ 15490292 (+)
G1261806 NA non-coding downstream 116469 15517996 ~ 15518212 (+)
G1260946 LOC106590444 other upstream 379275 15020992 ~ 15022053 (+)
LOC110489673 LOC106590441 other upstream 487205 14905377 ~ 14914892 (+)
G1260745 NA other upstream 732789 14666659 ~ 14668539 (+)
LOC110489644 NA other upstream 1038388 14360048 ~ 14362944 (+)
G1261980 NA other downstream 334403 15735930 ~ 15736417 (+)
mcmdc2 mcmdc2 other downstream 491441 15885437 ~ 15895996 (+)
LOC110489737 LOC106590377 other downstream 3458584 18859697 ~ 18866106 (+)
epb41l3a LOC106590342 other downstream 4272586 19598284 ~ 19680110 (+)

Expression


Co-expression Network