Gene
RNA
| Item | Value |
|---|---|
| gene id | G1261696 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048579.1 |
| NCBI id | CM023233.2 |
| chromosome length | 81569517 |
| location | 15403784 ~ 15404023 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU1441648 | True | 240 | lncRNA | 0.35 | 1 | 15403784 | 15404023 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110489655 | LOC106590438 | coding | upstream | 38024 | 15345480 ~ 15365760 (+) |
| LOC110489660 | pan3 | coding | upstream | 210734 | 15166247 ~ 15194945 (+) |
| LOC110489664 | LOC106590452 | coding | upstream | 255950 | 15142902 ~ 15147834 (+) |
| LOC110489665 | NA | coding | upstream | 263007 | 15137323 ~ 15140777 (+) |
| gtf3ab | LOC106590449 | coding | upstream | 294935 | 15106017 ~ 15108849 (+) |
| LOC110489682 | LOC106590392 | coding | downstream | 128447 | 15532470 ~ 15534780 (+) |
| LOC110489686 | LOC106590396 | coding | downstream | 292873 | 15696896 ~ 15706601 (+) |
| LOC110490928 | dnjc5 | coding | downstream | 336001 | 15740024 ~ 15747900 (+) |
| LOC110489687 | LOC106590397 | coding | downstream | 346766 | 15750789 ~ 15759102 (+) |
| LOC110489688 | rrs1 | coding | downstream | 402195 | 15806218 ~ 15807665 (+) |
| G1261692 | NA | non-coding | upstream | 2257 | 15401328 ~ 15401527 (+) |
| G1261134 | NA | non-coding | upstream | 10741 | 15392817 ~ 15393043 (+) |
| G1261132 | NA | non-coding | upstream | 13200 | 15390362 ~ 15390584 (+) |
| G1261128 | NA | non-coding | upstream | 16010 | 15387456 ~ 15387774 (+) |
| G1261125 | NA | non-coding | upstream | 20808 | 15382681 ~ 15382976 (+) |
| G1261713 | NA | non-coding | downstream | 23140 | 15427163 ~ 15427902 (+) |
| G1261729 | NA | non-coding | downstream | 56057 | 15460080 ~ 15474988 (+) |
| G1261783 | NA | non-coding | downstream | 86059 | 15490082 ~ 15490292 (+) |
| G1261806 | NA | non-coding | downstream | 113973 | 15517996 ~ 15518212 (+) |
| G1261814 | NA | non-coding | downstream | 119763 | 15523786 ~ 15529777 (+) |
| G1260946 | LOC106590444 | other | upstream | 381731 | 15020992 ~ 15022053 (+) |
| LOC110489673 | LOC106590441 | other | upstream | 489661 | 14905377 ~ 14914892 (+) |
| G1260745 | NA | other | upstream | 735245 | 14666659 ~ 14668539 (+) |
| LOC110489644 | NA | other | upstream | 1040844 | 14360048 ~ 14362944 (+) |
| G1261980 | NA | other | downstream | 331907 | 15735930 ~ 15736417 (+) |
| mcmdc2 | mcmdc2 | other | downstream | 488945 | 15885437 ~ 15895996 (+) |
| LOC110489737 | LOC106590377 | other | downstream | 3456088 | 18859697 ~ 18866106 (+) |
| epb41l3a | LOC106590342 | other | downstream | 4270090 | 19598284 ~ 19680110 (+) |
