Gene
RNA
| Item | Value |
|---|---|
| gene id | G1261752 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048579.1 |
| NCBI id | CM023233.2 |
| chromosome length | 81569517 |
| location | 15432989 ~ 15433346 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU1441713 | True | 250 | lncRNA | 0.42 | 2 | 15432989 | 15433346 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110489657 | LOC106590437 | coding | downstream | 102089 | 15327169 ~ 15330900 (-) |
| c1qtnf9 | LOC106590436 | coding | downstream | 110469 | 15319526 ~ 15322520 (-) |
| LOC110489659 | LOC106590434 | coding | downstream | 113919 | 15284371 ~ 15319070 (-) |
| LOC110489662 | LOC106579544 | coding | downstream | 162083 | 15195240 ~ 15270906 (-) |
| flt3 | LOC106590453 | coding | downstream | 271578 | 15151001 ~ 15161411 (-) |
| LOC110489683 | LOC106590393 | coding | upstream | 238691 | 15672037 ~ 15696647 (-) |
| LOC110489684 | LOC106590394 | coding | upstream | 273596 | 15706942 ~ 15735376 (-) |
| trnay-gua-4 | NA | coding | upstream | 315883 | 15749229 ~ 15749314 (-) |
| LOC100135941 | LOC100135941 | coding | upstream | 328098 | 15761444 ~ 15762978 (-) |
| LOC110489690 | LOC106590399 | coding | upstream | 388355 | 15821701 ~ 15845199 (-) |
| G1261695 | NA | non-coding | downstream | 29352 | 15403383 ~ 15403637 (-) |
| G1261688 | NA | non-coding | downstream | 42357 | 15390374 ~ 15390632 (-) |
| G1261686 | NA | non-coding | downstream | 44578 | 15388192 ~ 15388411 (-) |
| G1261685 | NA | non-coding | downstream | 45264 | 15387491 ~ 15387725 (-) |
| G1261682 | NA | non-coding | downstream | 50585 | 15382205 ~ 15382404 (-) |
| G1261782 | NA | non-coding | upstream | 55567 | 15488913 ~ 15489176 (-) |
| G1261797 | NA | non-coding | upstream | 72887 | 15506233 ~ 15506560 (-) |
| G1261799 | NA | non-coding | upstream | 74440 | 15507786 ~ 15507988 (-) |
| G1261826 | NA | non-coding | upstream | 100545 | 15533891 ~ 15534244 (-) |
| G1261871 | NA | non-coding | upstream | 146564 | 15579910 ~ 15584845 (-) |
| G1261602 | NA | other | downstream | 243173 | 15189546 ~ 15189816 (-) |
| G1261529 | rpl21 | other | downstream | 334273 | 15096280 ~ 15098716 (-) |
| G1261562 | NA | other | downstream | 353637 | 15077710 ~ 15080745 (-) |
| qtrt2 | qtrt2 | other | downstream | 751097 | 14666658 ~ 14692839 (-) |
| LOC110489648 | sh3k1 | other | downstream | 887513 | 14508427 ~ 14545697 (-) |
| G1261796 | NA | other | upstream | 72352 | 15505698 ~ 15506198 (-) |
| G1262503 | NA | other | upstream | 372904 | 15806250 ~ 15807617 (-) |
| LOC110490929 | LOC106590401 | other | upstream | 555940 | 15938237 ~ 16035283 (-) |
| G1262745 | NA | other | upstream | 842663 | 16276009 ~ 16276552 (-) |
