G1261729


Basic Information

Item Value
gene id G1261729
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048579.1
NCBI id CM023233.2
chromosome length 81569517
location 15460080 ~ 15474988 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1441687
gaatagaacacaccatacatcacatatagaatagaacacaccgtacatcacatatagaatagaacacaccgtacatcacaaatagaatagaacagaccatACATCACAAATGgattagaacacaccatacattacgtatagaatagaacacaccatacatcacaaatggaatagaacacaccatacatcacatatagattagaacacaccatacatcacatatagaatagaacacaccatacatcacatatagaatagaacacaccatacatcacatatagaatagaacacaccatacatcacatatagaatagaacacaccgtacatcacatatagaatagaacacaccgtacatcacaaatagaatagaacagaccatACATCACAAATGgattagaacacaccatacattacgtatagaatagaacacaccatacatcacaaatggaatagaacacaccatacATCACATattgaatagaacacaccatacatcacatatagattagaacacaccatacatcacatatagaatagaacacaccatacatcacatatagaatagaacacaccatacatcacatatagaatagaacacaccatacatcacatatagaatagaacagaccatacatcacatatagattagaacacgccatacatcacatatagaatagaacacaccgtacatcacctatagaatagaacacaccatacatcacatatagaatagaacacaccctacatcacaaatagaatagaacacaccctacatcacaaatagaat

Function

NR:

description
PREDICTED: uncharacterized protein LOC106611203

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1441687 True 788 lncRNA 0.34 2 15460080 15474988

Neighbor

gene id symbol gene type direction distance location
LOC110489655 LOC106590438 coding upstream 94320 15345480 ~ 15365760 (+)
LOC110489660 pan3 coding upstream 267030 15166247 ~ 15194945 (+)
LOC110489664 LOC106590452 coding upstream 312246 15142902 ~ 15147834 (+)
LOC110489665 NA coding upstream 319303 15137323 ~ 15140777 (+)
gtf3ab LOC106590449 coding upstream 351231 15106017 ~ 15108849 (+)
LOC110489682 LOC106590392 coding downstream 57482 15532470 ~ 15534780 (+)
LOC110489686 LOC106590396 coding downstream 221908 15696896 ~ 15706601 (+)
LOC110490928 dnjc5 coding downstream 265036 15740024 ~ 15747900 (+)
LOC110489687 LOC106590397 coding downstream 275801 15750789 ~ 15759102 (+)
LOC110489688 rrs1 coding downstream 331230 15806218 ~ 15807665 (+)
G1261713 NA non-coding upstream 32178 15427163 ~ 15427902 (+)
G1261696 NA non-coding upstream 56057 15403784 ~ 15404023 (+)
G1261692 NA non-coding upstream 58553 15401328 ~ 15401527 (+)
G1261134 NA non-coding upstream 67037 15392817 ~ 15393043 (+)
G1261132 NA non-coding upstream 69496 15390362 ~ 15390584 (+)
G1261783 NA non-coding downstream 15094 15490082 ~ 15490292 (+)
G1261806 NA non-coding downstream 43008 15517996 ~ 15518212 (+)
G1261814 NA non-coding downstream 48798 15523786 ~ 15529777 (+)
G1261842 NA non-coding downstream 73368 15548356 ~ 15549609 (+)
G1261858 NA non-coding downstream 87086 15562074 ~ 15562316 (+)
G1260946 LOC106590444 other upstream 438027 15020992 ~ 15022053 (+)
LOC110489673 LOC106590441 other upstream 545957 14905377 ~ 14914892 (+)
G1260745 NA other upstream 791541 14666659 ~ 14668539 (+)
LOC110489644 NA other upstream 1097140 14360048 ~ 14362944 (+)
G1261980 NA other downstream 260942 15735930 ~ 15736417 (+)
mcmdc2 mcmdc2 other downstream 417980 15885437 ~ 15895996 (+)
LOC110489737 LOC106590377 other downstream 3385123 18859697 ~ 18866106 (+)
epb41l3a LOC106590342 other downstream 4199125 19598284 ~ 19680110 (+)

Expression


Co-expression Network