G1261783


Basic Information

Item Value
gene id G1261783
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048579.1
NCBI id CM023233.2
chromosome length 81569517
location 15490082 ~ 15490292 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1441747
CTATATCAATGTAACATTGTGTCCTTTATCAATGTAATAGTGTGTCCTATATCAATGTAACAGTGTGTCCTATATCAATGTAACAGTGTGTCCTTCAGTATATCCATGTAAAATTGTCCTACGGTGTATCTATTTAACTTTGTGTCCTATATCAATGTAAAAGTATGTGCTATATCAATGCAACAGTGTGTCCTATATCAATGTAAAAGTA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1441747 True 211 lncRNA 0.32 1 15490082 15490292

Neighbor

gene id symbol gene type direction distance location
LOC110489655 LOC106590438 coding upstream 124322 15345480 ~ 15365760 (+)
LOC110489660 pan3 coding upstream 297032 15166247 ~ 15194945 (+)
LOC110489664 LOC106590452 coding upstream 342248 15142902 ~ 15147834 (+)
LOC110489665 NA coding upstream 349305 15137323 ~ 15140777 (+)
gtf3ab LOC106590449 coding upstream 381233 15106017 ~ 15108849 (+)
LOC110489682 LOC106590392 coding downstream 42178 15532470 ~ 15534780 (+)
LOC110489686 LOC106590396 coding downstream 206604 15696896 ~ 15706601 (+)
LOC110490928 dnjc5 coding downstream 249732 15740024 ~ 15747900 (+)
LOC110489687 LOC106590397 coding downstream 260497 15750789 ~ 15759102 (+)
LOC110489688 rrs1 coding downstream 315926 15806218 ~ 15807665 (+)
G1261729 NA non-coding upstream 15094 15460080 ~ 15474988 (+)
G1261713 NA non-coding upstream 62180 15427163 ~ 15427902 (+)
G1261696 NA non-coding upstream 86059 15403784 ~ 15404023 (+)
G1261692 NA non-coding upstream 88555 15401328 ~ 15401527 (+)
G1261134 NA non-coding upstream 97039 15392817 ~ 15393043 (+)
G1261806 NA non-coding downstream 27704 15517996 ~ 15518212 (+)
G1261814 NA non-coding downstream 33494 15523786 ~ 15529777 (+)
G1261842 NA non-coding downstream 58064 15548356 ~ 15549609 (+)
G1261858 NA non-coding downstream 71782 15562074 ~ 15562316 (+)
G1261901 NA non-coding downstream 121938 15612230 ~ 15612449 (+)
G1260946 LOC106590444 other upstream 468029 15020992 ~ 15022053 (+)
LOC110489673 LOC106590441 other upstream 575959 14905377 ~ 14914892 (+)
G1260745 NA other upstream 821543 14666659 ~ 14668539 (+)
LOC110489644 NA other upstream 1127142 14360048 ~ 14362944 (+)
G1261980 NA other downstream 245638 15735930 ~ 15736417 (+)
mcmdc2 mcmdc2 other downstream 402676 15885437 ~ 15895996 (+)
LOC110489737 LOC106590377 other downstream 3369819 18859697 ~ 18866106 (+)
epb41l3a LOC106590342 other downstream 4183821 19598284 ~ 19680110 (+)

Expression


Co-expression Network