G1261858


Basic Information

Item Value
gene id G1261858
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048579.1
NCBI id CM023233.2
chromosome length 81569517
location 15562074 ~ 15562316 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1441841
CATGATATACATACATGTAGTCATAGAAGAAGATGATGGGGATATGGAATTGACATAAAAAACCAATAGAATGACCTCAAAATGACCTCATTTTCTTTTCAGACGTTCTATCCTAGACTAAAAACTGATGCATCATTTTCTTTGTGTTTGTCTTCAGATTTGGATATGGAAAAATAATCCACACGGGTGATACATTTATAGATCATCCGTTTACACGACTGGGCACTTTACCTGAATAAATAT

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1441841 True 243 lncRNA 0.34 1 15562074 15562316

Neighbor

gene id symbol gene type direction distance location
LOC110489682 LOC106590392 coding upstream 27294 15532470 ~ 15534780 (+)
LOC110489655 LOC106590438 coding upstream 196314 15345480 ~ 15365760 (+)
LOC110489660 pan3 coding upstream 369024 15166247 ~ 15194945 (+)
LOC110489664 LOC106590452 coding upstream 414240 15142902 ~ 15147834 (+)
LOC110489665 NA coding upstream 421297 15137323 ~ 15140777 (+)
LOC110489686 LOC106590396 coding downstream 134580 15696896 ~ 15706601 (+)
LOC110490928 dnjc5 coding downstream 177708 15740024 ~ 15747900 (+)
LOC110489687 LOC106590397 coding downstream 188473 15750789 ~ 15759102 (+)
LOC110489688 rrs1 coding downstream 243902 15806218 ~ 15807665 (+)
LOC110489689 LOC106590398 coding downstream 253127 15815443 ~ 15819297 (+)
G1261842 NA non-coding upstream 12465 15548356 ~ 15549609 (+)
G1261814 NA non-coding upstream 32297 15523786 ~ 15529777 (+)
G1261806 NA non-coding upstream 43862 15517996 ~ 15518212 (+)
G1261783 NA non-coding upstream 71782 15490082 ~ 15490292 (+)
G1261729 NA non-coding upstream 87086 15460080 ~ 15474988 (+)
G1261901 NA non-coding downstream 49914 15612230 ~ 15612449 (+)
G1261919 NA non-coding downstream 62097 15624413 ~ 15627232 (+)
G1261922 NA non-coding downstream 68588 15630904 ~ 15631211 (+)
G1261918 NA non-coding downstream 99737 15662053 ~ 15662537 (+)
G1261917 NA non-coding downstream 101771 15664087 ~ 15664766 (+)
G1260946 LOC106590444 other upstream 540021 15020992 ~ 15022053 (+)
LOC110489673 LOC106590441 other upstream 647951 14905377 ~ 14914892 (+)
G1260745 NA other upstream 893535 14666659 ~ 14668539 (+)
LOC110489644 NA other upstream 1199134 14360048 ~ 14362944 (+)
G1261980 NA other downstream 173614 15735930 ~ 15736417 (+)
mcmdc2 mcmdc2 other downstream 330652 15885437 ~ 15895996 (+)
LOC110489737 LOC106590377 other downstream 3297795 18859697 ~ 18866106 (+)
epb41l3a LOC106590342 other downstream 4111797 19598284 ~ 19680110 (+)

Expression


Co-expression Network