G1261910



Basic Information


Item Value
gene id G1261910
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information


Item Value
chromosome id NC_048579.1
NCBI id CM023233.2
chromosome length 81569517
location 15618093 ~ 15618341 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence


>TU1441893
actaGTATTATGgagaaactacaatgttgttgatccatcctcagttttctcctatcaaagccattaaactctgtaactgttttaaagtcaccattggcttcctCGTAAAATCCCTGACcggtttccttcctctacggcaactgagttagtaaggacgcttgtatctttgtagtgactgggggtattgatacaccatccaaagtgtaattaataacgtcACCCTACTCAAATGGATAGTCAATGTCTATC

Function


NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA


RNA id representative length rna type GC content exon number start site end site
TU1441893 True 249 lncRNA 0.40 1 15618093 15618341

Neighbor


gene id symbol gene type direction distance location
LOC110489656 abhd10 coding downstream 96696 15334691 ~ 15521397 (-)
LOC110489657 LOC106590437 coding downstream 287193 15327169 ~ 15330900 (-)
c1qtnf9 LOC106590436 coding downstream 295573 15319526 ~ 15322520 (-)
LOC110489659 LOC106590434 coding downstream 299023 15284371 ~ 15319070 (-)
LOC110489662 LOC106579544 coding downstream 347187 15195240 ~ 15270906 (-)
LOC110489683 LOC106590393 coding upstream 53696 15672037 ~ 15696647 (-)
LOC110489684 LOC106590394 coding upstream 88601 15706942 ~ 15735376 (-)
trnay-gua-4 NA coding upstream 130888 15749229 ~ 15749314 (-)
LOC100135941 LOC100135941 coding upstream 143103 15761444 ~ 15762978 (-)
LOC110489690 LOC106590399 coding upstream 203360 15821701 ~ 15845199 (-)
G1261886 NA non-coding downstream 17991 15599836 ~ 15600102 (-)
G1261871 NA non-coding downstream 33248 15579910 ~ 15584845 (-)
G1261826 NA non-coding downstream 83849 15533891 ~ 15534244 (-)
G1261799 NA non-coding downstream 110105 15507786 ~ 15507988 (-)
G1261797 NA non-coding downstream 111533 15506233 ~ 15506560 (-)
G1262413 NA non-coding upstream 12552 15630893 ~ 15631201 (-)
G1262476 NA non-coding upstream 149009 15767350 ~ 15767589 (-)
G1262480 NA non-coding upstream 153494 15771835 ~ 15772052 (-)
G1262489 NA non-coding upstream 164076 15782417 ~ 15782642 (-)
G1261796 NA other downstream 111895 15505698 ~ 15506198 (-)
G1261602 NA other downstream 428277 15189546 ~ 15189816 (-)
G1261529 rpl21 other downstream 519377 15096280 ~ 15098716 (-)
G1261562 NA other downstream 538741 15077710 ~ 15080745 (-)
qtrt2 qtrt2 other downstream 936201 14666658 ~ 14692839 (-)
G1262503 NA other upstream 187909 15806250 ~ 15807617 (-)
LOC110490929 LOC106590401 other upstream 370945 15938237 ~ 16035283 (-)
G1262745 NA other upstream 657668 16276009 ~ 16276552 (-)
G1263444 NA other upstream 1027303 16645644 ~ 16646417 (-)

Expression



Co-expression Network