G1261922


Basic Information

Item Value
gene id G1261922
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048579.1
NCBI id CM023233.2
chromosome length 81569517
location 15630904 ~ 15631211 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1441906
GTCctaaaatgtcagaaacattaacttgattgactatgctgtaggtcatgtaactgtttgttacattcaatatgctttgtggtcttcaccagacagaggttgctctctggttttgtgatgaaacaaagatcTGGTTGagtttattctgccactgtgtcttctcattgtctcggcctttaggcctacagtatatatcacagtgtcaaggcatatgaactaacaggttacagagcaaacaaagcaattatcacaacatataGGTTGGAATGTGGCTTTTCtccctggcttggcttccccagtgattttac

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1441906 True 308 lncRNA 0.40 1 15630904 15631211

Neighbor

gene id symbol gene type direction distance location
LOC110489682 LOC106590392 coding upstream 96124 15532470 ~ 15534780 (+)
LOC110489655 LOC106590438 coding upstream 265144 15345480 ~ 15365760 (+)
LOC110489660 pan3 coding upstream 437854 15166247 ~ 15194945 (+)
LOC110489664 LOC106590452 coding upstream 483070 15142902 ~ 15147834 (+)
LOC110489665 NA coding upstream 490127 15137323 ~ 15140777 (+)
LOC110489686 LOC106590396 coding downstream 65685 15696896 ~ 15706601 (+)
LOC110490928 dnjc5 coding downstream 108813 15740024 ~ 15747900 (+)
LOC110489687 LOC106590397 coding downstream 119578 15750789 ~ 15759102 (+)
LOC110489688 rrs1 coding downstream 175007 15806218 ~ 15807665 (+)
LOC110489689 LOC106590398 coding downstream 184232 15815443 ~ 15819297 (+)
G1261919 NA non-coding upstream 3672 15624413 ~ 15627232 (+)
G1261901 NA non-coding upstream 18455 15612230 ~ 15612449 (+)
G1261858 NA non-coding upstream 68588 15562074 ~ 15562316 (+)
G1261842 NA non-coding upstream 81295 15548356 ~ 15549609 (+)
G1261814 NA non-coding upstream 101127 15523786 ~ 15529777 (+)
G1261918 NA non-coding downstream 30842 15662053 ~ 15662537 (+)
G1261917 NA non-coding downstream 32876 15664087 ~ 15664766 (+)
G1261940 NA non-coding downstream 38337 15669548 ~ 15669921 (+)
G1261941 NA non-coding downstream 40689 15671900 ~ 15674666 (+)
G1260946 LOC106590444 other upstream 608851 15020992 ~ 15022053 (+)
LOC110489673 LOC106590441 other upstream 716781 14905377 ~ 14914892 (+)
G1260745 NA other upstream 962365 14666659 ~ 14668539 (+)
LOC110489644 NA other upstream 1267964 14360048 ~ 14362944 (+)
G1261980 NA other downstream 104719 15735930 ~ 15736417 (+)
mcmdc2 mcmdc2 other downstream 261757 15885437 ~ 15895996 (+)
LOC110489737 LOC106590377 other downstream 3228900 18859697 ~ 18866106 (+)
epb41l3a LOC106590342 other downstream 4042902 19598284 ~ 19680110 (+)

Expression


Co-expression Network