G1261918


Basic Information

Item Value
gene id G1261918
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048579.1
NCBI id CM023233.2
chromosome length 81569517
location 15662053 ~ 15662537 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1441901
acaatgcagtaatcaatatcaatgtagtactgaaaataacataaaatagaacaaaaacacacgagAAAGTAAGAAGCTTTATATTGGTCAggtccaataccatatttacaatatgcagggatactggagtggtaggggtatatatataggggtaaggtgactaggcatcaggatatatgataaataGAGTAGCAACAGCATAAATTaagattgtatgtgagtgtgtgcttgtgtgtagagtcagtataaatgtgtgtgcatgttatgtgtttttctgtgtcagtgtgagtgagcgagtgagtgtgTAGattcctgtgagtgtgcatagagacagtgcaaaacATAAATACAAGAGTCAACTCAGATAGCCAGTTTGTTAGGTatttagcagcattatggcttgggggtagaagctgttcaggaaccTGTAGGTGTCAGACTTCATGAgccagtaccgcttgctgtgtggaaacagagagaacagt

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1441901 True 485 lncRNA 0.39 1 15662053 15662537

Neighbor

gene id symbol gene type direction distance location
LOC110489682 LOC106590392 coding upstream 127273 15532470 ~ 15534780 (+)
LOC110489655 LOC106590438 coding upstream 296293 15345480 ~ 15365760 (+)
LOC110489660 pan3 coding upstream 469003 15166247 ~ 15194945 (+)
LOC110489664 LOC106590452 coding upstream 514219 15142902 ~ 15147834 (+)
LOC110489665 NA coding upstream 521276 15137323 ~ 15140777 (+)
LOC110489686 LOC106590396 coding downstream 34359 15696896 ~ 15706601 (+)
LOC110490928 dnjc5 coding downstream 77487 15740024 ~ 15747900 (+)
LOC110489687 LOC106590397 coding downstream 88252 15750789 ~ 15759102 (+)
LOC110489688 rrs1 coding downstream 143681 15806218 ~ 15807665 (+)
LOC110489689 LOC106590398 coding downstream 152906 15815443 ~ 15819297 (+)
G1261922 NA non-coding upstream 30842 15630904 ~ 15631211 (+)
G1261919 NA non-coding upstream 34821 15624413 ~ 15627232 (+)
G1261901 NA non-coding upstream 49604 15612230 ~ 15612449 (+)
G1261858 NA non-coding upstream 99737 15562074 ~ 15562316 (+)
G1261842 NA non-coding upstream 112444 15548356 ~ 15549609 (+)
G1261917 NA non-coding downstream 1550 15664087 ~ 15664766 (+)
G1261940 NA non-coding downstream 7011 15669548 ~ 15669921 (+)
G1261941 NA non-coding downstream 9363 15671900 ~ 15674666 (+)
G1261967 NA non-coding downstream 54737 15717274 ~ 15718014 (+)
G1260946 LOC106590444 other upstream 640000 15020992 ~ 15022053 (+)
LOC110489673 LOC106590441 other upstream 747930 14905377 ~ 14914892 (+)
G1260745 NA other upstream 993514 14666659 ~ 14668539 (+)
LOC110489644 NA other upstream 1299113 14360048 ~ 14362944 (+)
G1261980 NA other downstream 73393 15735930 ~ 15736417 (+)
mcmdc2 mcmdc2 other downstream 230431 15885437 ~ 15895996 (+)
LOC110489737 LOC106590377 other downstream 3197574 18859697 ~ 18866106 (+)
epb41l3a LOC106590342 other downstream 4011576 19598284 ~ 19680110 (+)

Expression


Co-expression Network