G1261980


Basic Information

Item Value
gene id G1261980
gene name NA
gene type unknown
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048579.1
NCBI id CM023233.2
chromosome length 81569517
location 15735930 ~ 15736417 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1441984
GTGAATGTCTGTCACACTCAGTGGGGAGGAGAACTTCCCACaaatgtatgagagagagagagagagagagagagagagagagagagagagaaaggaattcATACTACTCCTCCATCAATGTCAggctgacatacagtgccttgcgaaagtattcggcccccttgaactttgcgaccttttgccacatttcaggcttcaaacataaagatataaaactgtatttttttgtgaagaatcaacaacaagtgggacacagtcatgaagtggaacgacatttattggatatttcaaacttttttaacaaatcaaaaactgaaaaattggaggtgcaaaattattcagcccctttactttcagtgcagcaaactctctccagaagttcagtgaggatctctgaatgatccaatgttgacctaaatgactaatgatgataaatacaatccacctgtgtgtaatca

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1441984 True 458 TUCP 0.40 2 15735930 15736417

Neighbor

gene id symbol gene type direction distance location
LOC110489686 LOC106590396 coding upstream 29380 15696896 ~ 15706601 (+)
LOC110489682 LOC106590392 coding upstream 201150 15532470 ~ 15534780 (+)
LOC110489655 LOC106590438 coding upstream 370170 15345480 ~ 15365760 (+)
LOC110489660 pan3 coding upstream 542880 15166247 ~ 15194945 (+)
LOC110489664 LOC106590452 coding upstream 588096 15142902 ~ 15147834 (+)
LOC110490928 dnjc5 coding downstream 3607 15740024 ~ 15747900 (+)
LOC110489687 LOC106590397 coding downstream 14372 15750789 ~ 15759102 (+)
LOC110489688 rrs1 coding downstream 69801 15806218 ~ 15807665 (+)
LOC110489689 LOC106590398 coding downstream 79026 15815443 ~ 15819297 (+)
LOC110489691 sgk3 coding downstream 112483 15848900 ~ 15885366 (+)
G1261967 NA non-coding upstream 17916 15717274 ~ 15718014 (+)
G1261941 NA non-coding upstream 61264 15671900 ~ 15674666 (+)
G1261940 NA non-coding upstream 66009 15669548 ~ 15669921 (+)
G1261917 NA non-coding upstream 71164 15664087 ~ 15664766 (+)
G1262013 NA non-coding downstream 35497 15771914 ~ 15772162 (+)
G1262014 NA non-coding downstream 35779 15772196 ~ 15772465 (+)
G1262027 NA non-coding downstream 50464 15786881 ~ 15787081 (+)
G1262034 NA non-coding downstream 63504 15799921 ~ 15800162 (+)
G1262035 NA non-coding downstream 64540 15800957 ~ 15801181 (+)
G1260946 LOC106590444 other upstream 713877 15020992 ~ 15022053 (+)
LOC110489673 LOC106590441 other upstream 821807 14905377 ~ 14914892 (+)
G1260745 NA other upstream 1067391 14666659 ~ 14668539 (+)
mcmdc2 mcmdc2 other downstream 156551 15885437 ~ 15895996 (+)
LOC110489737 LOC106590377 other downstream 3123694 18859697 ~ 18866106 (+)
epb41l3a LOC106590342 other downstream 3937696 19598284 ~ 19680110 (+)
G1267949 pck2 other downstream 5103878 20840295 ~ 20841398 (+)
slc12a7b LOC106590280 other downstream 6049804 21729755 ~ 21794253 (+)

Expression


Co-expression Network