G1262013


Basic Information

Item Value
gene id G1262013
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048579.1
NCBI id CM023233.2
chromosome length 81569517
location 15771914 ~ 15772162 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1442023
ctcccattcttctctgcagatcctctcaagctctgtcgggttggatggggagcgtcgctgcacagctattttcaggtctctccagagatgtttgatcgggtttcCGTCCGGGATCTAGCTAGGCcgctcaagggcattcagagacttatcccgaagccactcctgcattgtcttggctgtgtgcttaggatcattgtcctataggtaggtgaacctttgcccaagtctgaggtcctgagcaccccagtc

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1442023 True 249 lncRNA 0.54 1 15771914 15772162

Neighbor

gene id symbol gene type direction distance location
LOC110489687 LOC106590397 coding upstream 12812 15750789 ~ 15759102 (+)
LOC110490928 dnjc5 coding upstream 24014 15740024 ~ 15747900 (+)
LOC110489686 LOC106590396 coding upstream 65364 15696896 ~ 15706601 (+)
LOC110489682 LOC106590392 coding upstream 237134 15532470 ~ 15534780 (+)
LOC110489655 LOC106590438 coding upstream 406154 15345480 ~ 15365760 (+)
LOC110489688 rrs1 coding downstream 34056 15806218 ~ 15807665 (+)
LOC110489689 LOC106590398 coding downstream 43281 15815443 ~ 15819297 (+)
LOC110489691 sgk3 coding downstream 76738 15848900 ~ 15885366 (+)
mcmdc2 mcmdc2 coding downstream 113275 15885437 ~ 15895996 (+)
LOC110489697 LOC106590402 coding downstream 318334 16090496 ~ 16114214 (+)
G1261967 NA non-coding upstream 53900 15717274 ~ 15718014 (+)
G1261941 NA non-coding upstream 97248 15671900 ~ 15674666 (+)
G1261940 NA non-coding upstream 101993 15669548 ~ 15669921 (+)
G1261917 NA non-coding upstream 107148 15664087 ~ 15664766 (+)
G1262014 NA non-coding downstream 34 15772196 ~ 15772465 (+)
G1262027 NA non-coding downstream 14719 15786881 ~ 15787081 (+)
G1262034 NA non-coding downstream 27759 15799921 ~ 15800162 (+)
G1262035 NA non-coding downstream 28795 15800957 ~ 15801181 (+)
G1262040 NA non-coding downstream 40421 15812583 ~ 15812841 (+)
G1261980 NA other upstream 35497 15735930 ~ 15736417 (+)
LOC110489660 pan3 other upstream 576969 15166247 ~ 15194945 (+)
G1260946 LOC106590444 other upstream 749861 15020992 ~ 15022053 (+)
LOC110489673 LOC106590441 other upstream 857791 14905377 ~ 14914892 (+)
LOC110489737 LOC106590377 other downstream 3087949 18859697 ~ 18866106 (+)
epb41l3a LOC106590342 other downstream 3901951 19598284 ~ 19680110 (+)
G1267949 pck2 other downstream 5068133 20840295 ~ 20841398 (+)
slc12a7b LOC106590280 other downstream 6014059 21729755 ~ 21794253 (+)

Expression


Co-expression Network