G1262494


Basic Information

Item Value
gene id G1262494
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048579.1
NCBI id CM023233.2
chromosome length 81569517
location 15792255 ~ 15792968 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1442587
CTATTTGGGGTGTATGGATATTATTATGGGCTGGGAAGAGGAGTGTGGTAGGGTTGTGACAAAGCAGCGGCCGTTATTCCTTGTCGTTAGGTCGGCCTGGGGCAATGTGCTGTATccatggttggttggttggttggtttggtTTGTCTCCTTTTCGGTCTGCCTTTCCGTCCAACTAAGCCACGAGCACCCCAGTGGCAAGTGTGACTATGTTATATCAAAACACTCACAACTCAGATGACTGGACTTGTGTGTGTAACCTACTAAACACACTTACACTCACATAAACCATCATACTAAACACACTTACACCCACATAAACCATCATACTAAACACACTTACACCCACATAAACCATCATACTAAACACACTTACACCCACATAAACCATCATACTAAACACACTTACACCCACATAAACCATCATACTAAACACACTTACACCCACATAAACCATCATACTAAACACACTTACACCCACATAAACCATCATACTAAACACACTTACACCCACATAAACCATCATACTAAACACACTTACACCCACATAAACCATCATAAAAATCATCTCAGCTGGAGAGCTTAACAGCTGTAGAACAAGAACAGACTATATGTCCGTAAGCATTCAGAGTGCAATTCTAAATCCCTAATCAAATTGTAGTGTTACTACGGAAAACATCATTCTTATTAGCTTCTGTTGAGGAACATCGACTG

Function

NR:

description
PREDICTED: histone H3.v1-like

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1442587 True 714 lncRNA 0.41 1 15792255 15792968

Neighbor

gene id symbol gene type direction distance location
LOC100135941 LOC100135941 coding downstream 29277 15761444 ~ 15762978 (-)
trnay-gua-4 NA coding downstream 42941 15749229 ~ 15749314 (-)
LOC110489684 LOC106590394 coding downstream 56879 15706942 ~ 15735376 (-)
LOC110489683 LOC106590393 coding downstream 95608 15672037 ~ 15696647 (-)
LOC110489656 abhd10 coding downstream 270858 15334691 ~ 15521397 (-)
LOC110489690 LOC106590399 coding upstream 28733 15821701 ~ 15845199 (-)
LOC110489693 NA coding upstream 101500 15894467 ~ 15898010 (-)
LOC110489694 LOC106590412 coding upstream 107512 15900480 ~ 15904342 (-)
LOC110489696 cops5 coding upstream 125427 15918395 ~ 15923805 (-)
LOC110490929 LOC106590401 coding upstream 145269 15938237 ~ 16035283 (-)
G1262491 NA non-coding downstream 5292 15786607 ~ 15786963 (-)
G1262489 NA non-coding downstream 9613 15782417 ~ 15782642 (-)
G1262480 NA non-coding downstream 20203 15771835 ~ 15772052 (-)
G1262476 NA non-coding downstream 24666 15767350 ~ 15767589 (-)
G1262498 NA non-coding upstream 6654 15799622 ~ 15799823 (-)
G1262501 NA non-coding upstream 10763 15803731 ~ 15803937 (-)
G1262506 NA non-coding upstream 20085 15813053 ~ 15813275 (-)
G1262507 NA non-coding upstream 21269 15814237 ~ 15814446 (-)
G1262508 NA non-coding upstream 21677 15814645 ~ 15814892 (-)
G1261796 NA other downstream 286057 15505698 ~ 15506198 (-)
G1261602 NA other downstream 602439 15189546 ~ 15189816 (-)
G1261529 rpl21 other downstream 693539 15096280 ~ 15098716 (-)
G1261562 NA other downstream 712903 15077710 ~ 15080745 (-)
qtrt2 qtrt2 other downstream 1110363 14666658 ~ 14692839 (-)
G1262503 NA other upstream 13282 15806250 ~ 15807617 (-)
G1262745 NA other upstream 483041 16276009 ~ 16276552 (-)
G1263444 NA other upstream 852676 16645644 ~ 16646417 (-)

Expression


Co-expression Network