Gene
RNA
| Item | Value |
|---|---|
| gene id | G1262040 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048579.1 |
| NCBI id | CM023233.2 |
| chromosome length | 81569517 |
| location | 15812583 ~ 15812841 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU1442050 | True | 259 | lncRNA | 0.34 | 1 | 15812583 | 15812841 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110489688 | rrs1 | coding | upstream | 4918 | 15806218 ~ 15807665 (+) |
| LOC110489687 | LOC106590397 | coding | upstream | 53481 | 15750789 ~ 15759102 (+) |
| LOC110490928 | dnjc5 | coding | upstream | 64683 | 15740024 ~ 15747900 (+) |
| LOC110489686 | LOC106590396 | coding | upstream | 106033 | 15696896 ~ 15706601 (+) |
| LOC110489682 | LOC106590392 | coding | upstream | 277803 | 15532470 ~ 15534780 (+) |
| LOC110489689 | LOC106590398 | coding | downstream | 2602 | 15815443 ~ 15819297 (+) |
| LOC110489691 | sgk3 | coding | downstream | 36059 | 15848900 ~ 15885366 (+) |
| mcmdc2 | mcmdc2 | coding | downstream | 72596 | 15885437 ~ 15895996 (+) |
| LOC110489697 | LOC106590402 | coding | downstream | 277655 | 16090496 ~ 16114214 (+) |
| LOC110489699 | LOC106590411 | coding | downstream | 307504 | 16120345 ~ 16125640 (+) |
| G1262035 | NA | non-coding | upstream | 11402 | 15800957 ~ 15801181 (+) |
| G1262034 | NA | non-coding | upstream | 12421 | 15799921 ~ 15800162 (+) |
| G1262027 | NA | non-coding | upstream | 25502 | 15786881 ~ 15787081 (+) |
| G1262014 | NA | non-coding | upstream | 40118 | 15772196 ~ 15772465 (+) |
| G1262013 | NA | non-coding | upstream | 40421 | 15771914 ~ 15772162 (+) |
| G1262041 | NA | non-coding | downstream | 793 | 15813634 ~ 15813852 (+) |
| G1262043 | NA | non-coding | downstream | 7415 | 15820256 ~ 15820669 (+) |
| G1262044 | NA | non-coding | downstream | 8891 | 15821732 ~ 15822240 (+) |
| G1262045 | NA | non-coding | downstream | 10078 | 15822919 ~ 15823190 (+) |
| G1262046 | NA | non-coding | downstream | 11631 | 15824472 ~ 15824923 (+) |
| G1261980 | NA | other | upstream | 76166 | 15735930 ~ 15736417 (+) |
| LOC110489660 | pan3 | other | upstream | 617638 | 15166247 ~ 15194945 (+) |
| G1260946 | LOC106590444 | other | upstream | 790530 | 15020992 ~ 15022053 (+) |
| LOC110489673 | LOC106590441 | other | upstream | 898460 | 14905377 ~ 14914892 (+) |
| LOC110489737 | LOC106590377 | other | downstream | 3047270 | 18859697 ~ 18866106 (+) |
| epb41l3a | LOC106590342 | other | downstream | 3861272 | 19598284 ~ 19680110 (+) |
| G1267949 | pck2 | other | downstream | 5027454 | 20840295 ~ 20841398 (+) |
| slc12a7b | LOC106590280 | other | downstream | 5973380 | 21729755 ~ 21794253 (+) |
