Gene
RNA
| Item | Value |
|---|---|
| gene id | G1262573 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048579.1 |
| NCBI id | CM023233.2 |
| chromosome length | 81569517 |
| location | 15956619 ~ 15956894 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU1442675 | True | 211 | lncRNA | 0.45 | 2 | 15956619 | 15956894 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110489696 | cops5 | coding | downstream | 32814 | 15918395 ~ 15923805 (-) |
| LOC110489694 | LOC106590412 | coding | downstream | 52277 | 15900480 ~ 15904342 (-) |
| LOC110489693 | NA | coding | downstream | 58609 | 15894467 ~ 15898010 (-) |
| LOC110489690 | LOC106590399 | coding | downstream | 111420 | 15821701 ~ 15845199 (-) |
| LOC100135941 | LOC100135941 | coding | downstream | 193641 | 15761444 ~ 15762978 (-) |
| LOC110490931 | cpa6 | coding | upstream | 81748 | 16038626 ~ 16079595 (-) |
| LOC110489700 | LOC106590414 | coding | upstream | 168474 | 16125368 ~ 16128702 (-) |
| LOC110489698 | LOC106590406 | coding | upstream | 172108 | 16129002 ~ 16144964 (-) |
| LOC110489701 | LOC106590404 | coding | upstream | 204460 | 16161354 ~ 16177141 (-) |
| shrprbck1r | LOC106590417 | coding | upstream | 249898 | 16206792 ~ 16219467 (-) |
| G1262563 | NA | non-coding | downstream | 21605 | 15934701 ~ 15935014 (-) |
| G1262521 | NA | non-coding | downstream | 107434 | 15848415 ~ 15849185 (-) |
| G1262510 | LOC106590398 | non-coding | downstream | 139177 | 15816037 ~ 15817442 (-) |
| G1262574 | NA | non-coding | upstream | 4418 | 15961312 ~ 15964183 (-) |
| G1262568 | NA | non-coding | upstream | 79397 | 16036291 ~ 16036458 (-) |
| G1262569 | NA | non-coding | upstream | 80955 | 16037849 ~ 16038167 (-) |
| G1262624 | NA | non-coding | upstream | 86304 | 16043198 ~ 16043525 (-) |
| G1262503 | NA | other | downstream | 149002 | 15806250 ~ 15807617 (-) |
| G1261796 | NA | other | downstream | 450421 | 15505698 ~ 15506198 (-) |
| G1261602 | NA | other | downstream | 766803 | 15189546 ~ 15189816 (-) |
| G1261529 | rpl21 | other | downstream | 857903 | 15096280 ~ 15098716 (-) |
| LOC110490929 | LOC106590401 | other | upstream | 32392 | 15938237 ~ 16035283 (-) |
| G1262745 | NA | other | upstream | 319115 | 16276009 ~ 16276552 (-) |
| G1263444 | NA | other | upstream | 688750 | 16645644 ~ 16646417 (-) |
| G1264199 | LOC106590429 | other | upstream | 1504934 | 17461828 ~ 17462977 (-) |
| G1265249 | NA | other | upstream | 2226897 | 18183791 ~ 18184123 (-) |
