G1262574


Basic Information

Item Value
gene id G1262574
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048579.1
NCBI id CM023233.2
chromosome length 81569517
location 15961312 ~ 15964183 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1442677
tattcaccttgtactgtatacctgaatatattcaccttgtactgtatagacagctgaatatattcaccttgtactgtatagacagctgaatatattcaccttgtactgtatagacagctgaatatattcaccttgtactgtatagacagctgaatatattcaccttgtactgtatagacagctgaatatattcaccttgtactgaatacctgaatatatattcaccttgtactgtatagacagctggatatattcaccttgtactgtatagacagctgaatatattcaccttgtactgtatagacagctgaatatattcaccttgtactgtatagacagctggatatattcaccttgtactgtatagacagctgaatatattcaccttgtactgtatagacagctgaatatattcaccttgtactgtatagacagctgaatatattcaccttgtactgtatagaca

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1442677 True 466 lncRNA 0.34 2 15961312 15964183

Neighbor

gene id symbol gene type direction distance location
LOC110489696 cops5 coding downstream 37507 15918395 ~ 15923805 (-)
LOC110489694 LOC106590412 coding downstream 56970 15900480 ~ 15904342 (-)
LOC110489693 NA coding downstream 63302 15894467 ~ 15898010 (-)
LOC110489690 LOC106590399 coding downstream 116113 15821701 ~ 15845199 (-)
LOC100135941 LOC100135941 coding downstream 198334 15761444 ~ 15762978 (-)
LOC110490931 cpa6 coding upstream 74459 16038626 ~ 16079595 (-)
LOC110489700 LOC106590414 coding upstream 161185 16125368 ~ 16128702 (-)
LOC110489698 LOC106590406 coding upstream 164819 16129002 ~ 16144964 (-)
LOC110489701 LOC106590404 coding upstream 197171 16161354 ~ 16177141 (-)
shrprbck1r LOC106590417 coding upstream 242609 16206792 ~ 16219467 (-)
G1262573 NA non-coding downstream 4418 15956619 ~ 15956894 (-)
G1262563 NA non-coding downstream 26298 15934701 ~ 15935014 (-)
G1262521 NA non-coding downstream 112127 15848415 ~ 15849185 (-)
G1262568 NA non-coding upstream 72108 16036291 ~ 16036458 (-)
G1262569 NA non-coding upstream 73666 16037849 ~ 16038167 (-)
G1262624 NA non-coding upstream 79015 16043198 ~ 16043525 (-)
G1262650 NA non-coding upstream 121454 16085637 ~ 16085880 (-)
G1262503 NA other downstream 153695 15806250 ~ 15807617 (-)
G1261796 NA other downstream 455114 15505698 ~ 15506198 (-)
G1261602 NA other downstream 771496 15189546 ~ 15189816 (-)
G1261529 rpl21 other downstream 862596 15096280 ~ 15098716 (-)
LOC110490929 LOC106590401 other upstream 25103 15938237 ~ 16035283 (-)
G1262745 NA other upstream 311826 16276009 ~ 16276552 (-)
G1263444 NA other upstream 681461 16645644 ~ 16646417 (-)
G1264199 LOC106590429 other upstream 1497645 17461828 ~ 17462977 (-)
G1265249 NA other upstream 2219608 18183791 ~ 18184123 (-)

Expression


Co-expression Network