Gene
RNA
| Item | Value |
|---|---|
| gene id | G1262568 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048579.1 |
| NCBI id | CM023233.2 |
| chromosome length | 81569517 |
| location | 16036291 ~ 16036458 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU1442668 | True | 168 | lncRNA | 0.41 | 1 | 16036291 | 16036458 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110490929 | LOC106590401 | coding | downstream | 1008 | 15938237 ~ 16035283 (-) |
| LOC110489696 | cops5 | coding | downstream | 112486 | 15918395 ~ 15923805 (-) |
| LOC110489694 | LOC106590412 | coding | downstream | 131949 | 15900480 ~ 15904342 (-) |
| LOC110489693 | NA | coding | downstream | 138281 | 15894467 ~ 15898010 (-) |
| LOC110489690 | LOC106590399 | coding | downstream | 191092 | 15821701 ~ 15845199 (-) |
| LOC110490931 | cpa6 | coding | upstream | 2184 | 16038626 ~ 16079595 (-) |
| LOC110489700 | LOC106590414 | coding | upstream | 88910 | 16125368 ~ 16128702 (-) |
| LOC110489698 | LOC106590406 | coding | upstream | 92544 | 16129002 ~ 16144964 (-) |
| LOC110489701 | LOC106590404 | coding | upstream | 124896 | 16161354 ~ 16177141 (-) |
| shrprbck1r | LOC106590417 | coding | upstream | 170334 | 16206792 ~ 16219467 (-) |
| G1262574 | NA | non-coding | downstream | 72108 | 15961312 ~ 15964183 (-) |
| G1262573 | NA | non-coding | downstream | 79397 | 15956619 ~ 15956894 (-) |
| G1262563 | NA | non-coding | downstream | 101277 | 15934701 ~ 15935014 (-) |
| G1262521 | NA | non-coding | downstream | 187106 | 15848415 ~ 15849185 (-) |
| G1262569 | NA | non-coding | upstream | 1391 | 16037849 ~ 16038167 (-) |
| G1262624 | NA | non-coding | upstream | 6740 | 16043198 ~ 16043525 (-) |
| G1262650 | NA | non-coding | upstream | 49179 | 16085637 ~ 16085880 (-) |
| G1262694 | NA | non-coding | upstream | 164072 | 16200530 ~ 16200789 (-) |
| G1262503 | NA | other | downstream | 228674 | 15806250 ~ 15807617 (-) |
| G1261796 | NA | other | downstream | 530093 | 15505698 ~ 15506198 (-) |
| G1261602 | NA | other | downstream | 846475 | 15189546 ~ 15189816 (-) |
| G1262745 | NA | other | upstream | 239551 | 16276009 ~ 16276552 (-) |
| G1263444 | NA | other | upstream | 609186 | 16645644 ~ 16646417 (-) |
| G1264199 | LOC106590429 | other | upstream | 1425370 | 17461828 ~ 17462977 (-) |
| G1265249 | NA | other | upstream | 2147333 | 18183791 ~ 18184123 (-) |
| G1265456 | LOC106590371 | other | upstream | 2540081 | 18576539 ~ 18580163 (-) |
