Gene
RNA
| Item | Value |
|---|---|
| gene id | G1262699 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048579.1 |
| NCBI id | CM023233.2 |
| chromosome length | 81569517 |
| location | 16220479 ~ 16220739 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU1442807 | True | 261 | lncRNA | 0.40 | 1 | 16220479 | 16220739 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| shrprbck1r | LOC106590417 | coding | downstream | 1012 | 16206792 ~ 16219467 (-) |
| LOC110489701 | LOC106590404 | coding | downstream | 43338 | 16161354 ~ 16177141 (-) |
| LOC110489698 | LOC106590406 | coding | downstream | 75515 | 16129002 ~ 16144964 (-) |
| LOC110489700 | LOC106590414 | coding | downstream | 91777 | 16125368 ~ 16128702 (-) |
| LOC110490931 | cpa6 | coding | downstream | 140884 | 16038626 ~ 16079595 (-) |
| LOC110489704 | LOC106590419 | coding | upstream | 98160 | 16318899 ~ 16324594 (-) |
| LOC110489705 | LOC106590420 | coding | upstream | 108206 | 16328945 ~ 16439917 (-) |
| hus1 | hus1 | coding | upstream | 227706 | 16448445 ~ 16460069 (-) |
| LOC118938791 | NA | coding | upstream | 391761 | 16612010 ~ 16617742 (-) |
| LOC110489710 | LOC106590425 | coding | upstream | 447148 | 16667887 ~ 16680822 (-) |
| G1262697 | NA | non-coding | downstream | 17635 | 16202633 ~ 16202844 (-) |
| G1262694 | NA | non-coding | downstream | 19690 | 16200530 ~ 16200789 (-) |
| G1262650 | NA | non-coding | downstream | 134599 | 16085637 ~ 16085880 (-) |
| G1262624 | NA | non-coding | downstream | 176954 | 16043198 ~ 16043525 (-) |
| G1262708 | NA | non-coding | upstream | 9237 | 16229976 ~ 16230355 (-) |
| G1262709 | NA | non-coding | upstream | 13773 | 16234512 ~ 16234797 (-) |
| G1262728 | NA | non-coding | upstream | 27659 | 16248398 ~ 16248684 (-) |
| G1262730 | NA | non-coding | upstream | 29898 | 16250637 ~ 16250840 (-) |
| G1262732 | NA | non-coding | upstream | 31844 | 16252583 ~ 16253035 (-) |
| LOC110490929 | LOC106590401 | other | downstream | 185357 | 15938237 ~ 16035283 (-) |
| LOC110489690 | LOC106590399 | other | downstream | 375338 | 15821701 ~ 15845199 (-) |
| G1262503 | NA | other | downstream | 412862 | 15806250 ~ 15807617 (-) |
| G1261796 | NA | other | downstream | 714281 | 15505698 ~ 15506198 (-) |
| G1261602 | NA | other | downstream | 1030663 | 15189546 ~ 15189816 (-) |
| G1262745 | NA | other | upstream | 55270 | 16276009 ~ 16276552 (-) |
| G1263444 | NA | other | upstream | 424905 | 16645644 ~ 16646417 (-) |
| G1264199 | LOC106590429 | other | upstream | 1241089 | 17461828 ~ 17462977 (-) |
| G1265249 | NA | other | upstream | 1963052 | 18183791 ~ 18184123 (-) |
| G1265456 | LOC106590371 | other | upstream | 2355800 | 18576539 ~ 18580163 (-) |
