Gene
RNA
| Item | Value |
|---|---|
| gene id | G1262730 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048579.1 |
| NCBI id | CM023233.2 |
| chromosome length | 81569517 |
| location | 16250637 ~ 16250840 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU1442850 | True | 204 | lncRNA | 0.51 | 1 | 16250637 | 16250840 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| shrprbck1r | LOC106590417 | coding | downstream | 31170 | 16206792 ~ 16219467 (-) |
| LOC110489701 | LOC106590404 | coding | downstream | 73496 | 16161354 ~ 16177141 (-) |
| LOC110489698 | LOC106590406 | coding | downstream | 105673 | 16129002 ~ 16144964 (-) |
| LOC110489700 | LOC106590414 | coding | downstream | 121935 | 16125368 ~ 16128702 (-) |
| LOC110490931 | cpa6 | coding | downstream | 171042 | 16038626 ~ 16079595 (-) |
| LOC110489704 | LOC106590419 | coding | upstream | 68059 | 16318899 ~ 16324594 (-) |
| LOC110489705 | LOC106590420 | coding | upstream | 78105 | 16328945 ~ 16439917 (-) |
| hus1 | hus1 | coding | upstream | 197605 | 16448445 ~ 16460069 (-) |
| LOC118938791 | NA | coding | upstream | 361660 | 16612010 ~ 16617742 (-) |
| LOC110489710 | LOC106590425 | coding | upstream | 417047 | 16667887 ~ 16680822 (-) |
| G1262728 | NA | non-coding | downstream | 1953 | 16248398 ~ 16248684 (-) |
| G1262709 | NA | non-coding | downstream | 15840 | 16234512 ~ 16234797 (-) |
| G1262708 | NA | non-coding | downstream | 20282 | 16229976 ~ 16230355 (-) |
| G1262699 | NA | non-coding | downstream | 29898 | 16220479 ~ 16220739 (-) |
| G1262697 | NA | non-coding | downstream | 47793 | 16202633 ~ 16202844 (-) |
| G1262732 | NA | non-coding | upstream | 1743 | 16252583 ~ 16253035 (-) |
| G1262737 | NA | non-coding | upstream | 18011 | 16268851 ~ 16269266 (-) |
| G1262739 | NA | non-coding | upstream | 19621 | 16270461 ~ 16270687 (-) |
| G1262741 | NA | non-coding | upstream | 21863 | 16272703 ~ 16272937 (-) |
| G1262742 | NA | non-coding | upstream | 22990 | 16273830 ~ 16274423 (-) |
| LOC110490929 | LOC106590401 | other | downstream | 215515 | 15938237 ~ 16035283 (-) |
| LOC110489690 | LOC106590399 | other | downstream | 405496 | 15821701 ~ 15845199 (-) |
| G1262503 | NA | other | downstream | 443020 | 15806250 ~ 15807617 (-) |
| G1261796 | NA | other | downstream | 744439 | 15505698 ~ 15506198 (-) |
| G1261602 | NA | other | downstream | 1060821 | 15189546 ~ 15189816 (-) |
| G1262745 | NA | other | upstream | 25169 | 16276009 ~ 16276552 (-) |
| G1263444 | NA | other | upstream | 394804 | 16645644 ~ 16646417 (-) |
| G1264199 | LOC106590429 | other | upstream | 1210988 | 17461828 ~ 17462977 (-) |
| G1265249 | NA | other | upstream | 1932951 | 18183791 ~ 18184123 (-) |
| G1265456 | LOC106590371 | other | upstream | 2325699 | 18576539 ~ 18580163 (-) |
