Gene
RNA
| Item | Value |
|---|---|
| gene id | G1262794 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048579.1 |
| NCBI id | CM023233.2 |
| chromosome length | 81569517 |
| location | 16388453 ~ 16391029 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU1442923 | True | 227 | lncRNA | 0.35 | 2 | 16388453 | 16391029 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110489704 | LOC106590419 | coding | downstream | 63859 | 16318899 ~ 16324594 (-) |
| shrprbck1r | LOC106590417 | coding | downstream | 168986 | 16206792 ~ 16219467 (-) |
| LOC110489701 | LOC106590404 | coding | downstream | 211312 | 16161354 ~ 16177141 (-) |
| LOC110489698 | LOC106590406 | coding | downstream | 243489 | 16129002 ~ 16144964 (-) |
| LOC110489700 | LOC106590414 | coding | downstream | 259751 | 16125368 ~ 16128702 (-) |
| hus1 | hus1 | coding | upstream | 57416 | 16448445 ~ 16460069 (-) |
| LOC118938791 | NA | coding | upstream | 221471 | 16612010 ~ 16617742 (-) |
| LOC110489710 | LOC106590425 | coding | upstream | 276858 | 16667887 ~ 16680822 (-) |
| dph2 | dph2 | coding | upstream | 295612 | 16686641 ~ 16690526 (-) |
| LOC110490827 | LOC106590390 | coding | upstream | 304519 | 16695548 ~ 16703091 (-) |
| G1262781 | NA | non-coding | downstream | 32618 | 16355613 ~ 16355835 (-) |
| G1262777 | NA | non-coding | downstream | 39366 | 16342993 ~ 16349087 (-) |
| G1262770 | NA | non-coding | downstream | 74313 | 16312472 ~ 16314140 (-) |
| G1262767 | NA | non-coding | downstream | 84150 | 16303975 ~ 16304303 (-) |
| G1262754 | NA | non-coding | downstream | 100093 | 16287043 ~ 16288360 (-) |
| G1262818 | NA | non-coding | upstream | 35710 | 16426739 ~ 16458725 (-) |
| G1262843 | NA | non-coding | upstream | 81121 | 16472150 ~ 16473529 (-) |
| G1262846 | NA | non-coding | upstream | 84612 | 16475641 ~ 16477867 (-) |
| G1262876 | NA | non-coding | upstream | 116800 | 16507829 ~ 16508049 (-) |
| G1262877 | NA | non-coding | upstream | 117609 | 16508638 ~ 16509045 (-) |
| G1262745 | NA | other | downstream | 111901 | 16276009 ~ 16276552 (-) |
| LOC110490929 | LOC106590401 | other | downstream | 353331 | 15938237 ~ 16035283 (-) |
| LOC110489690 | LOC106590399 | other | downstream | 543312 | 15821701 ~ 15845199 (-) |
| G1262503 | NA | other | downstream | 580836 | 15806250 ~ 15807617 (-) |
| G1261796 | NA | other | downstream | 882255 | 15505698 ~ 15506198 (-) |
| G1263444 | NA | other | upstream | 254615 | 16645644 ~ 16646417 (-) |
| G1264199 | LOC106590429 | other | upstream | 1070799 | 17461828 ~ 17462977 (-) |
| G1265249 | NA | other | upstream | 1792762 | 18183791 ~ 18184123 (-) |
| G1265456 | LOC106590371 | other | upstream | 2185510 | 18576539 ~ 18580163 (-) |
| G1266471 | NA | other | upstream | 2717530 | 19108559 ~ 19109357 (-) |
