G1262846


Basic Information

Item Value
gene id G1262846
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048579.1
NCBI id CM023233.2
chromosome length 81569517
location 16475641 ~ 16477867 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1442977
CAAACACATAGGCATTCAGCTTCCCTTATACCCACACAGTGTTCCCCCACAATTGTATAGGTGGCTCAAGGCTCACTTTCTCGCCAGCTGAAAGAGTTTGGCTATAATGGGTTTCAATTGACAGTTTTAGTTTCTAGCCGGTCTGGAAATTGCTATGGGGGCCTTTACATCTCGTATGAAAAGTGTGGAAGGGAAACacaaataacacactgataacaaacTGAAACtgataacacactgataacaaacTGAAACtgataacacactgataacaaacTGAAACTGATAACACACTGATGGCAAACGGATAAACTGATAACACACTGATAAAAAACtgataacacactgataacacactgataacaaacAACTGAAAAtgataacacactgataacaaacTGAAACtgataacacactgataacacattgataacacactgataacaaacTGAAACTGACAACAAACTGAAACTGATAACAAACTGATGACAAACTGATGACAAACTGATGACAAACTGAAACtgataacacactgataacaaacTGAAACtggtaacacactgataacacactgataacaaactgataacacactgataacaaacTGAAACTGATAACACACTGATGACAAACTGATACCAAACTGATAACACACTAATAACAAACtgataacacactgataacaaacTGATAACACAATGATGACAAACtgataacacactgataacacaatagaaaatgactggagtaaaaatgaaagtcacccagtaaaacccttgagtaaaagtctaaaagtatttggttttaaatatact

Function

NR:

description
uncharacterized protein LOC110502537

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1442977 True 815 lncRNA 0.35 2 16475641 16477867

Neighbor

gene id symbol gene type direction distance location
hus1 hus1 coding downstream 15572 16448445 ~ 16460069 (-)
LOC110489705 LOC106590420 coding downstream 35724 16328945 ~ 16439917 (-)
LOC110489704 LOC106590419 coding downstream 151047 16318899 ~ 16324594 (-)
shrprbck1r LOC106590417 coding downstream 256174 16206792 ~ 16219467 (-)
LOC110489701 LOC106590404 coding downstream 298500 16161354 ~ 16177141 (-)
LOC118938791 NA coding upstream 134633 16612010 ~ 16617742 (-)
LOC110489710 LOC106590425 coding upstream 190020 16667887 ~ 16680822 (-)
dph2 dph2 coding upstream 208774 16686641 ~ 16690526 (-)
LOC110490827 LOC106590390 coding upstream 217681 16695548 ~ 16703091 (-)
LOC110489714 LOC106590427 coding upstream 242200 16720067 ~ 17062892 (-)
G1262843 NA non-coding downstream 2112 16472150 ~ 16473529 (-)
G1262818 NA non-coding downstream 16916 16426739 ~ 16458725 (-)
G1262794 NA non-coding downstream 84612 16388453 ~ 16391029 (-)
G1262781 NA non-coding downstream 119806 16355613 ~ 16355835 (-)
G1262777 NA non-coding downstream 126554 16342993 ~ 16349087 (-)
G1262876 NA non-coding upstream 29962 16507829 ~ 16508049 (-)
G1262877 NA non-coding upstream 30771 16508638 ~ 16509045 (-)
G1262879 NA non-coding upstream 31893 16509760 ~ 16510015 (-)
G1262899 NA non-coding upstream 47989 16525856 ~ 16526155 (-)
G1262924 NA non-coding upstream 62820 16540687 ~ 16541000 (-)
G1262745 NA other downstream 199089 16276009 ~ 16276552 (-)
LOC110490929 LOC106590401 other downstream 440519 15938237 ~ 16035283 (-)
LOC110489690 LOC106590399 other downstream 630500 15821701 ~ 15845199 (-)
G1262503 NA other downstream 668024 15806250 ~ 15807617 (-)
G1261796 NA other downstream 969443 15505698 ~ 15506198 (-)
G1263444 NA other upstream 167777 16645644 ~ 16646417 (-)
G1264199 LOC106590429 other upstream 983961 17461828 ~ 17462977 (-)
G1265249 NA other upstream 1705924 18183791 ~ 18184123 (-)
G1265456 LOC106590371 other upstream 2098672 18576539 ~ 18580163 (-)
G1266471 NA other upstream 2630692 19108559 ~ 19109357 (-)

Expression


Co-expression Network