Gene
RNA
| Item | Value |
|---|---|
| gene id | G1263052 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048579.1 |
| NCBI id | CM023233.2 |
| chromosome length | 81569517 |
| location | 16659190 ~ 16659397 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU1443195 | True | 208 | lncRNA | 0.38 | 1 | 16659190 | 16659397 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110489709 | anks6 | coding | upstream | 707 | 16630112 ~ 16658483 (+) |
| LOC110489708 | LOC106590383 | coding | upstream | 166001 | 16464241 ~ 16493189 (+) |
| LOC110489703 | LOC106590416 | coding | upstream | 347404 | 16229826 ~ 16311952 (+) |
| LOC110490826 | LOC106590409 | coding | upstream | 471451 | 16184122 ~ 16187739 (+) |
| LOC110489699 | LOC106590411 | coding | upstream | 533550 | 16120345 ~ 16125640 (+) |
| LOC100136240 | LOC100136240 | coding | downstream | 20881 | 16680278 ~ 16686648 (+) |
| ggh | LOC106590426 | coding | downstream | 56753 | 16716150 ~ 16719709 (+) |
| LOC118938946 | NA | coding | downstream | 569353 | 17228750 ~ 17230560 (+) |
| LOC110490933 | LOC106590429 | coding | downstream | 584760 | 17244157 ~ 17472962 (+) |
| LOC110489719 | LOC106590432 | coding | downstream | 877898 | 17537295 ~ 17641808 (+) |
| G1263042 | NA | non-coding | upstream | 275 | 16658565 ~ 16658915 (+) |
| G1263037 | NA | non-coding | upstream | 26645 | 16632312 ~ 16632545 (+) |
| G1262875 | NA | non-coding | upstream | 150145 | 16508652 ~ 16509045 (+) |
| G1262867 | NA | non-coding | upstream | 157789 | 16501044 ~ 16501401 (+) |
| G1263053 | NA | non-coding | downstream | 675 | 16660072 ~ 16660317 (+) |
| G1263063 | NA | non-coding | downstream | 17469 | 16676866 ~ 16677304 (+) |
| G1263064 | NA | non-coding | downstream | 18549 | 16677946 ~ 16678171 (+) |
| G1263105 | NA | non-coding | downstream | 101840 | 16761237 ~ 16761713 (+) |
| G1263874 | NA | non-coding | downstream | 699178 | 17358575 ~ 17358854 (+) |
| mcmdc2 | mcmdc2 | other | upstream | 765026 | 15885437 ~ 15895996 (+) |
| G1261980 | NA | other | upstream | 922773 | 15735930 ~ 15736417 (+) |
| LOC110489686 | LOC106590396 | other | upstream | 952651 | 15696896 ~ 15706601 (+) |
| LOC110489660 | pan3 | other | upstream | 1464245 | 15166247 ~ 15194945 (+) |
| G1260946 | LOC106590444 | other | upstream | 1637137 | 15020992 ~ 15022053 (+) |
| LOC110489737 | LOC106590377 | other | downstream | 2200714 | 18859697 ~ 18866106 (+) |
| epb41l3a | LOC106590342 | other | downstream | 3014716 | 19598284 ~ 19680110 (+) |
| G1267949 | pck2 | other | downstream | 4180898 | 20840295 ~ 20841398 (+) |
| slc12a7b | LOC106590280 | other | downstream | 5126824 | 21729755 ~ 21794253 (+) |
| LOC110489812 | rdh12 | other | downstream | 6473462 | 23132828 ~ 23146739 (+) |
