G1263053


Basic Information

Item Value
gene id G1263053
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048579.1
NCBI id CM023233.2
chromosome length 81569517
location 16660072 ~ 16660317 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1443196
ccccagcacaaggtgtacctgtgaaatgatcatgctgtttaagcagcttattgatatgccacacctgtcaggtggatggattgttttggaaaaggagaaatgctcacctacagggatgtgaacacatttgtgcacaaaattagctttttgtgcgtatggaacctttctgagattttttatttcaaataatggaacatgggaccaacgctttacatgttgcgtttatatttttgctcagtgtactTT

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1443196 True 246 lncRNA 0.39 1 16660072 16660317

Neighbor

gene id symbol gene type direction distance location
LOC110489709 anks6 coding upstream 1589 16630112 ~ 16658483 (+)
LOC110489708 LOC106590383 coding upstream 166883 16464241 ~ 16493189 (+)
LOC110489703 LOC106590416 coding upstream 348286 16229826 ~ 16311952 (+)
LOC110490826 LOC106590409 coding upstream 472333 16184122 ~ 16187739 (+)
LOC110489699 LOC106590411 coding upstream 534432 16120345 ~ 16125640 (+)
LOC100136240 LOC100136240 coding downstream 19961 16680278 ~ 16686648 (+)
ggh LOC106590426 coding downstream 55833 16716150 ~ 16719709 (+)
LOC118938946 NA coding downstream 568433 17228750 ~ 17230560 (+)
LOC110490933 LOC106590429 coding downstream 583840 17244157 ~ 17472962 (+)
LOC110489719 LOC106590432 coding downstream 876978 17537295 ~ 17641808 (+)
G1263052 NA non-coding upstream 675 16659190 ~ 16659397 (+)
G1263042 NA non-coding upstream 1157 16658565 ~ 16658915 (+)
G1263037 NA non-coding upstream 27527 16632312 ~ 16632545 (+)
G1262875 NA non-coding upstream 151027 16508652 ~ 16509045 (+)
G1263063 NA non-coding downstream 16549 16676866 ~ 16677304 (+)
G1263064 NA non-coding downstream 17629 16677946 ~ 16678171 (+)
G1263105 NA non-coding downstream 100920 16761237 ~ 16761713 (+)
G1263874 NA non-coding downstream 698258 17358575 ~ 17358854 (+)
G1263880 NA non-coding downstream 709117 17369434 ~ 17369726 (+)
mcmdc2 mcmdc2 other upstream 765908 15885437 ~ 15895996 (+)
G1261980 NA other upstream 923655 15735930 ~ 15736417 (+)
LOC110489686 LOC106590396 other upstream 953533 15696896 ~ 15706601 (+)
LOC110489660 pan3 other upstream 1465127 15166247 ~ 15194945 (+)
G1260946 LOC106590444 other upstream 1638019 15020992 ~ 15022053 (+)
LOC110489737 LOC106590377 other downstream 2199794 18859697 ~ 18866106 (+)
epb41l3a LOC106590342 other downstream 3013796 19598284 ~ 19680110 (+)
G1267949 pck2 other downstream 4179978 20840295 ~ 20841398 (+)
slc12a7b LOC106590280 other downstream 5125904 21729755 ~ 21794253 (+)
LOC110489812 rdh12 other downstream 6472542 23132828 ~ 23146739 (+)

Expression


Co-expression Network