G1264090


Basic Information

Item Value
gene id G1264090
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048579.1
NCBI id CM023233.2
chromosome length 81569517
location 17201154 ~ 17202348 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1444330
actcagcccctgtaatagggttagaggcagagaatcccagtggaaagaggggaaccggccaggcagagacagcaagggcagttcgttgctccagagcctttccgttcaccttcccaatcctgggccagactacactcaatcatatcacccactgaagagatgagtcttcagtaaagacatgggtaggcagaccgttccataaaaatggagctcaataggagaaagccctgcctccagctgtttgcttagaagttctagggacaattaggaggcctgcgtcttgtgaccgtagtgtacgtgtagttatgtacggcaggaccaaatcagagagataggtaggagcaagcccatgtaatgctttgtaggttagcagtaaaaccttgaaatcagcccttgctttgacaggaagccagtgtagagaggctagcactggagtaatatgatcattttttttggttctagtcaggattctagcagccgtatttagcactaactgaagtttatttagtgctttatccgggtagccggaaagtagagcattgcagtagtctaacctagaagtgacaaaagcatggattaatttttctgcataattttttggacagaaagtttctgatttttgcaatgttacgtagatggaaaaaagctgtccttgaaatggtcttgatatgttcttcaaaagagagatcagggtccagagtaagacttccagtttggtgtggcgccatttccgttccaattttctggaaacttgcttcagagctcgggtattttctgtgtaccagggagctagtttcttatgagaaatgtttttagtttttaggggtgcaactgcatctagggtattgcgcaagtttaaattgagttcctcagttaggtggttaactgatttttgtcctctggcgtccttgggtagacagagggaatctggaaggacatcaaggaatctttgtgttgtctgtgaatttatagcacgacttttgatgttccttggttggggtctgagcagattatttgttgcaattgcaaacgtaataaaatggtggtccgatagtccaggattatgaggaaaaacattaagatccacaacatttattccatgggacaaaactaggtccagcgtatgactgtgacagtgagtgggtccagagacatgttggacaaaacccactgagtcgatgatggctccgaaagt

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1444330 True 1195 lncRNA 0.44 1 17201154 17202348

Neighbor

gene id symbol gene type direction distance location
LOC110489714 LOC106590427 coding downstream 138262 16720067 ~ 17062892 (-)
LOC110490827 LOC106590390 coding downstream 498063 16695548 ~ 16703091 (-)
dph2 dph2 coding downstream 510628 16686641 ~ 16690526 (-)
LOC110489710 LOC106590425 coding downstream 520332 16667887 ~ 16680822 (-)
LOC118938791 NA coding downstream 583412 16612010 ~ 16617742 (-)
actr3b LOC106590428 coding upstream 4934 17207282 ~ 17226440 (-)
LOC110489717 LOC106590430 coding upstream 274616 17476964 ~ 17528010 (-)
bcl2a LOC106590353 coding upstream 459363 17661711 ~ 17728790 (-)
LOC110489721 LOC106590355 coding upstream 540301 17742649 ~ 17746298 (-)
LOC110489722 LOC106590357 coding upstream 548900 17751248 ~ 17756522 (-)
G1263575 NA non-coding downstream 292266 16875778 ~ 16908888 (-)
G1263464 NA non-coding downstream 460797 16693875 ~ 16740357 (-)
G1263458 NA non-coding downstream 535126 16665793 ~ 16666028 (-)
G1263456 NA non-coding downstream 539914 16661025 ~ 16661240 (-)
G1264153 NA non-coding upstream 150560 17352908 ~ 17353122 (-)
G1264154 NA non-coding upstream 151324 17353672 ~ 17353939 (-)
G1264156 NA non-coding upstream 153973 17356321 ~ 17356567 (-)
G1264157 NA non-coding upstream 154239 17356587 ~ 17356819 (-)
G1264158 NA non-coding upstream 156298 17358646 ~ 17358910 (-)
G1263444 NA other downstream 554737 16645644 ~ 16646417 (-)
G1262745 NA other downstream 924602 16276009 ~ 16276552 (-)
LOC110490929 LOC106590401 other downstream 1166032 15938237 ~ 16035283 (-)
LOC110489690 LOC106590399 other downstream 1356013 15821701 ~ 15845199 (-)
G1262503 NA other downstream 1393537 15806250 ~ 15807617 (-)
G1264199 LOC106590429 other upstream 259480 17461828 ~ 17462977 (-)
G1265249 NA other upstream 981443 18183791 ~ 18184123 (-)
G1265456 LOC106590371 other upstream 1374191 18576539 ~ 18580163 (-)
G1266471 NA other upstream 1906211 19108559 ~ 19109357 (-)
G1266708 LOC106590345 other upstream 2232670 19435018 ~ 19453770 (-)

Expression


Co-expression Network