G1263885


Basic Information

Item Value
gene id G1263885
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048579.1
NCBI id CM023233.2
chromosome length 81569517
location 17379501 ~ 17379715 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1444081
GAACatagtggtctccatcattgggaaattgaaaaaatatggaactacccagtcTCTGTCTAGAGCTGGCCGGCCGACAAAACTGAGaaaccgggcaagaaggaccttgttcagggagaggtgaccaagaactcaatcaccactctgacagaactacagaatTCCTTGGCTGAGTTAGTCTACAgaacttcaccaatctgggctttattggagag

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1444081 True 215 lncRNA 0.47 1 17379501 17379715

Neighbor

gene id symbol gene type direction distance location
LOC118938946 NA coding upstream 148941 17228750 ~ 17230560 (+)
ggh LOC106590426 coding upstream 659792 16716150 ~ 16719709 (+)
LOC100136240 LOC100136240 coding upstream 692853 16680278 ~ 16686648 (+)
LOC110489709 anks6 coding upstream 721018 16630112 ~ 16658483 (+)
LOC110489708 LOC106590383 coding upstream 886312 16464241 ~ 16493189 (+)
LOC110489719 LOC106590432 coding downstream 157580 17537295 ~ 17641808 (+)
LOC110489724 LOC106590359 coding downstream 610130 17989845 ~ 18092131 (+)
dnah5l LOC106590358 coding downstream 721972 18101687 ~ 18171361 (+)
LOC110489727 LOC106590362 coding downstream 848114 18227829 ~ 18275594 (+)
LOC110489731 LOC106590368 coding downstream 926499 18306214 ~ 18325293 (+)
G1263881 NA non-coding upstream 7100 17372164 ~ 17372401 (+)
G1263880 NA non-coding upstream 9775 17369434 ~ 17369726 (+)
G1263874 NA non-coding upstream 20647 17358575 ~ 17358854 (+)
G1263105 NA non-coding upstream 617788 16761237 ~ 16761713 (+)
G1263064 NA non-coding upstream 701330 16677946 ~ 16678171 (+)
G1263889 NA non-coding downstream 5709 17385424 ~ 17387097 (+)
G1263915 NA non-coding downstream 88096 17467811 ~ 17468072 (+)
G1263994 NA non-coding downstream 244431 17624146 ~ 17625139 (+)
G1264001 NA non-coding downstream 268425 17648140 ~ 17648399 (+)
G1264409 NA non-coding downstream 390701 17770416 ~ 17770850 (+)
mcmdc2 mcmdc2 other upstream 1485337 15885437 ~ 15895996 (+)
G1261980 NA other upstream 1643084 15735930 ~ 15736417 (+)
LOC110489686 LOC106590396 other upstream 1672962 15696896 ~ 15706601 (+)
LOC110489660 pan3 other upstream 2184556 15166247 ~ 15194945 (+)
G1260946 LOC106590444 other upstream 2357448 15020992 ~ 15022053 (+)
LOC110489737 LOC106590377 other downstream 1480396 18859697 ~ 18866106 (+)
epb41l3a LOC106590342 other downstream 2294398 19598284 ~ 19680110 (+)
G1267949 pck2 other downstream 3460580 20840295 ~ 20841398 (+)
slc12a7b LOC106590280 other downstream 4406506 21729755 ~ 21794253 (+)
LOC110489812 rdh12 other downstream 5753144 23132828 ~ 23146739 (+)

Expression


Co-expression Network