G1264199 (LOC106590429)


Basic Information

Item Value
gene id G1264199
gene name LOC106590429
gene type unknown
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048579.1
NCBI id CM023233.2
chromosome length 81569517
location 17461828 ~ 17462977 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1444458
TTGGGTGAGGCGCCGGTGAGCACCAGGTCATCGTAGCCCTGTTCCATCACCCGCACCACAAACTCCGGCCGGCCCTCGTTCTCCTCCACCAAGCACAGGTAGCGGCAGCGGCGGTTGCCGTGACGAGTGCTCCAGTAGATGCGGCTGGCCTGGTAGCCCACGGGGAAGATGGCATTGGCCGAGTGGAAGGCGGCCATCTGCTGGGGAAGCAGCTGACCCACAGTGTGGAACACCAGGCTGCCCACACGGAACGTGTGCCGGTGCTCGCCACGCTGCATGATGCTGGCCATCTGCCGCGCCTCATCACGCTGCACGTAGACACGGCGGAACACTGCGAAGCAGCGCAGCTCGTGGTTAGTGGCGGGTGCCACGGCCCTGTCGCTGCCGATGCCCCGGGGCCGGTGCAGGTGGCACAGCATGGTCTTGTCCTTGAAGAAGGTGCACTGGGCCTTGAGAGCGCATGTGAAGTGGTAGGCATTGGCACAGCGCAACCGGTGGCAGCGGCTGGTGGCGCCCGTCTGCTGGCAGTAGGCACAGCGCACCGCCATGCCCCGCCGTAACGCCAGCTCCACGTTGATAAGGGCGCCTGCCTGCGTCTCATATACCTCCGATGACCACAGTGCGCAGTTAAGGTGCACCCACAAGTCTAGGTCCAGGTTGAGGAGCCGGGCGGGCCCGTCCGTCACACCGTCGCCCTCCTCGTGGCAGAAGCAGCAACGTCGAAGGTCGCGGGGAAGGGGATCAGGACGCAGAGAGGCGCCCAGCTTCCTCAGCAGCTTGTCCATCTCGTCCTCACCGGGCAGAGAGGAAAGCAGGGTTCTCCTAGTGGGAACCACAATGTGTACGCTCCACTTGCGCCAACGCAGGCCCTTCCAGCGCTTGTGGTGGTACGGCGACATATCACCTCCCCCGCTGGCTGAGTGGACCGCCCTGGGCCTTTGCTTGAACTTGACCGTCACCTTGAGAGTGTCCGGCTTGGGTTTCTCAGAGGGGAAGGAGATGGGATGGGGACTGGAGGGGGGCGACTGTTTGGGCTGCAGCTGGGCCAGGCAGTGGACGTCCAGTGTGGACATGTTGTTACTATACTGGTGGAGCACCTTAGACGGGCTCTCTTTGACCGACGACTCAGGCAAGAGAGGAGACATGTTTG

Function

NR:

description
histone-lysine N-methyltransferase 2C-like

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1444458 True 1150 TUCP 0.63 1 17461828 17462977

Neighbor

gene id symbol gene type direction distance location
actr3b LOC106590428 coding downstream 235388 17207282 ~ 17226440 (-)
LOC110489714 LOC106590427 coding downstream 398936 16720067 ~ 17062892 (-)
LOC110490827 LOC106590390 coding downstream 758737 16695548 ~ 16703091 (-)
dph2 dph2 coding downstream 771302 16686641 ~ 16690526 (-)
LOC110489710 LOC106590425 coding downstream 781006 16667887 ~ 16680822 (-)
LOC110489717 LOC106590430 coding upstream 13987 17476964 ~ 17528010 (-)
bcl2a LOC106590353 coding upstream 198734 17661711 ~ 17728790 (-)
LOC110489721 LOC106590355 coding upstream 279672 17742649 ~ 17746298 (-)
LOC110489722 LOC106590357 coding upstream 288271 17751248 ~ 17756522 (-)
LOC118938947 NA coding upstream 633747 18096724 ~ 18097899 (-)
G1264183 NA non-coding downstream 80787 17380786 ~ 17381041 (-)
G1264181 NA non-coding downstream 81855 17379705 ~ 17379973 (-)
G1264174 NA non-coding downstream 88789 17372832 ~ 17373039 (-)
G1264171 NA non-coding downstream 90807 17370391 ~ 17371021 (-)
G1264169 NA non-coding downstream 93337 17368098 ~ 17368491 (-)
G1264242 NA non-coding upstream 4112 17467089 ~ 17467366 (-)
G1264243 NA non-coding upstream 5847 17468824 ~ 17469234 (-)
G1264198 NA non-coding upstream 9368 17472345 ~ 17551433 (-)
G1264287 NA non-coding upstream 107232 17570209 ~ 17572134 (-)
G1264298 NA non-coding upstream 121627 17584604 ~ 17584939 (-)
G1263444 NA other downstream 815411 16645644 ~ 16646417 (-)
G1262745 NA other downstream 1185276 16276009 ~ 16276552 (-)
LOC110490929 LOC106590401 other downstream 1426706 15938237 ~ 16035283 (-)
LOC110489690 LOC106590399 other downstream 1616687 15821701 ~ 15845199 (-)
G1262503 NA other downstream 1654211 15806250 ~ 15807617 (-)
G1265249 NA other upstream 720814 18183791 ~ 18184123 (-)
G1265456 LOC106590371 other upstream 1113562 18576539 ~ 18580163 (-)
G1266471 NA other upstream 1645582 19108559 ~ 19109357 (-)
G1266708 LOC106590345 other upstream 1972041 19435018 ~ 19453770 (-)
G1267414 NA other upstream 2804989 20267966 ~ 20268488 (-)

Expression


Co-expression Network