G1264287


Basic Information

Item Value
gene id G1264287
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048579.1
NCBI id CM023233.2
chromosome length 81569517
location 17570209 ~ 17572134 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1444560
AATTTGTTATGTCTATGTATTGTGATACAAATTGTATTATAAAGTCTCTGCCAATACTCAGCCCTAATAACTACCTTATTAACAATACAAGTCTGGTAATTAAAAGGGTTATTCAATTAgcgacagtaccagtcaaaagtttggacacacctactcattcaaggtttttctttatttttacaattttctacattgtaaaataatagtgaagacatcaaaactatgaactaacacataaccaaaaaagcgttaaactaatctaaatatattttatatttgagattcttcaaagtagccaccctttgccttgatgacagctttgcacactcttggcattctctcaaccagcttcatgaggtagtcacctggaatgcatttcaattaacaggtgtgccttgttaaaagttcatttgtggaagttctttccttcttaatgtgtttgagccagtcagttgttgtgacaaggtaaggggtggtatagagaagaaagccctatttggtaaaataccaagcccatattatggtaagaacagctcaaataagcaaagagaaacgacagtccatcattactttaaaacatacaGGTCTGTCAATGCAGAAAATTGTATAGTcacaaaaccatcaagcactacaATGAAACTactcttatgaggaccgccacaggaaaggaagacccagagttacctctgctgcagaggataagttcattagagttaccagcctcagaaattgcagcccaaataaatgtttcacagagttcaagtaacagacaaatctcaacatcaactgttcagaggagaatgcatgaatcaggccttcatggttgaattgctgcaaagaaaccactactaaaggacaccaataagaagaagatactttcttgggccaagaaacacaagcaatggacattagactggtggaaatctgtcctttggtctgatgagttcaaatttgagatttttggttccaaccgccatgtctttgtgagacgcagagtaggtgaacggatgatcgccgcatgtgtggttcctaccgtgaatcaaatcaaagtttatttgtcacgtgcgccgaatacaacaggtgtagacctcacagtgaaatgcaccAATGGTgcgaaaaggtgtgtgtgtgtgtgtgtgtgtaggaaggtaagtaaagacatttgaaaaaaagagtagcaaggctattacagacacctgttagtcaggcttattgaggtagtatgtacatgtaggtatcgttaaagtgactatgcatatatgatgaacagagagtagcagaggcgtaaaaagaggggttggagggtggtgagacacaatgcagatagcccggttagccaatgtgcgggagcactggttggtcggatCAATTCAGGAGGAAgcattgaggaggaggtgtgagggtgttggggtgctttgctggtgacactgtctgttatttatttagaaatcgaggcacagttaaccagcatgtctaccacagcattctgcagctatatgccatcccatatggtttgcgactagtgggactatcatttgtttttcataaggacaatgacccaacacacctccaggagtgctgcatcagatgacctggcctccacaatcactcaacctcgacccaattgagatggtttgggatgagttgtaccacaagagtgaaggaaaagcagccaacaagtgctcagcatatgtgggaactccttcaagacttttggaaaagcattcaaggtgaagctggttgagagaatgccaagagcgtgcaaagctgtcatcaaggcaaagggtggctactttgaagaatctaaaatatatttagatttgtttaacgcttttttg

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1444560 True 1838 lncRNA 0.41 2 17570209 17572134

Neighbor

gene id symbol gene type direction distance location
LOC110489717 LOC106590430 coding downstream 42199 17476964 ~ 17528010 (-)
actr3b LOC106590428 coding downstream 343769 17207282 ~ 17226440 (-)
LOC110489714 LOC106590427 coding downstream 507317 16720067 ~ 17062892 (-)
LOC110490827 LOC106590390 coding downstream 867118 16695548 ~ 16703091 (-)
dph2 dph2 coding downstream 879683 16686641 ~ 16690526 (-)
bcl2a LOC106590353 coding upstream 89577 17661711 ~ 17728790 (-)
LOC110489721 LOC106590355 coding upstream 170515 17742649 ~ 17746298 (-)
LOC110489722 LOC106590357 coding upstream 179114 17751248 ~ 17756522 (-)
LOC118938947 NA coding upstream 524590 18096724 ~ 18097899 (-)
cavin4b LOC106590360 coding upstream 597588 18169722 ~ 18178814 (-)
G1264198 NA non-coding downstream 18776 17472345 ~ 17551433 (-)
G1264243 NA non-coding downstream 100975 17468824 ~ 17469234 (-)
G1264242 NA non-coding downstream 102843 17467089 ~ 17467366 (-)
G1264183 NA non-coding downstream 189168 17380786 ~ 17381041 (-)
G1264181 NA non-coding downstream 190236 17379705 ~ 17379973 (-)
G1264298 NA non-coding upstream 12470 17584604 ~ 17584939 (-)
G1264310 NA non-coding upstream 25601 17597735 ~ 17598034 (-)
G1264335 NA non-coding upstream 70036 17642170 ~ 17642459 (-)
G1264340 NA non-coding upstream 77020 17649154 ~ 17649356 (-)
G1264408 NA non-coding upstream 196902 17769036 ~ 17769354 (-)
G1264199 LOC106590429 other downstream 107232 17461828 ~ 17462977 (-)
G1263444 NA other downstream 923792 16645644 ~ 16646417 (-)
G1262745 NA other downstream 1293657 16276009 ~ 16276552 (-)
LOC110490929 LOC106590401 other downstream 1535087 15938237 ~ 16035283 (-)
LOC110489690 LOC106590399 other downstream 1725068 15821701 ~ 15845199 (-)
G1265249 NA other upstream 611657 18183791 ~ 18184123 (-)
G1265456 LOC106590371 other upstream 1004405 18576539 ~ 18580163 (-)
G1266471 NA other upstream 1536425 19108559 ~ 19109357 (-)
G1266708 LOC106590345 other upstream 1862884 19435018 ~ 19453770 (-)
G1267414 NA other upstream 2695832 20267966 ~ 20268488 (-)

Expression


Co-expression Network