Gene
RNA
| Item | Value |
|---|---|
| gene id | G1264408 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048579.1 |
| NCBI id | CM023233.2 |
| chromosome length | 81569517 |
| location | 17769036 ~ 17769354 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| description |
|---|
| serine/threonine-protein phosphatase 2A 56 kDa regulatory subunit delta isoform isoform X1 |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU1444686 | True | 319 | lncRNA | 0.54 | 1 | 17769036 | 17769354 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110489722 | LOC106590357 | coding | downstream | 12514 | 17751248 ~ 17756522 (-) |
| LOC110489721 | LOC106590355 | coding | downstream | 22738 | 17742649 ~ 17746298 (-) |
| bcl2a | LOC106590353 | coding | downstream | 40246 | 17661711 ~ 17728790 (-) |
| LOC110489717 | LOC106590430 | coding | downstream | 241026 | 17476964 ~ 17528010 (-) |
| actr3b | LOC106590428 | coding | downstream | 542596 | 17207282 ~ 17226440 (-) |
| LOC118938947 | NA | coding | upstream | 327370 | 18096724 ~ 18097899 (-) |
| cavin4b | LOC106590360 | coding | upstream | 400368 | 18169722 ~ 18178814 (-) |
| LOC110489726 | LOC106590361 | coding | upstream | 426721 | 18196075 ~ 18208500 (-) |
| LOC110489728 | NA | coding | upstream | 506122 | 18275476 ~ 18291919 (-) |
| LOC110489729 | LOC106590364 | coding | upstream | 522673 | 18292027 ~ 18301287 (-) |
| G1264340 | NA | non-coding | downstream | 119680 | 17649154 ~ 17649356 (-) |
| G1264335 | NA | non-coding | downstream | 126577 | 17642170 ~ 17642459 (-) |
| G1264310 | NA | non-coding | downstream | 171002 | 17597735 ~ 17598034 (-) |
| G1264298 | NA | non-coding | downstream | 184097 | 17584604 ~ 17584939 (-) |
| G1264287 | NA | non-coding | downstream | 196902 | 17570209 ~ 17572134 (-) |
| G1264509 | LOC106590351 | non-coding | upstream | 73376 | 17842730 ~ 17842986 (-) |
| G1264566 | NA | non-coding | upstream | 117694 | 17887048 ~ 17887255 (-) |
| G1264581 | NA | non-coding | upstream | 128454 | 17897808 ~ 17898040 (-) |
| G1264598 | NA | non-coding | upstream | 139156 | 17908510 ~ 17908714 (-) |
| G1264734 | NA | non-coding | upstream | 153981 | 17923335 ~ 17923588 (-) |
| G1264199 | LOC106590429 | other | downstream | 306059 | 17461828 ~ 17462977 (-) |
| G1263444 | NA | other | downstream | 1122619 | 16645644 ~ 16646417 (-) |
| G1262745 | NA | other | downstream | 1492484 | 16276009 ~ 16276552 (-) |
| LOC110490929 | LOC106590401 | other | downstream | 1733914 | 15938237 ~ 16035283 (-) |
| LOC110489690 | LOC106590399 | other | downstream | 1923895 | 15821701 ~ 15845199 (-) |
| G1265249 | NA | other | upstream | 414437 | 18183791 ~ 18184123 (-) |
| G1265456 | LOC106590371 | other | upstream | 807185 | 18576539 ~ 18580163 (-) |
| G1266471 | NA | other | upstream | 1339205 | 19108559 ~ 19109357 (-) |
| G1266708 | LOC106590345 | other | upstream | 1665664 | 19435018 ~ 19453770 (-) |
| G1267414 | NA | other | upstream | 2498612 | 20267966 ~ 20268488 (-) |
