G1264433


Basic Information

Item Value
gene id G1264433
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048579.1
NCBI id CM023233.2
chromosome length 81569517
location 17786255 ~ 17786527 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1444711
GgttggatgtaaaaaaaaaaaaaaaaaagcactctAAAATGCCAATTGCACACGCCCTCAAAacttggcattgtgttgtgtgacaaaactgcacattttagagtgggttttattatccccagcacaaggtgcacctgtgtaatgatcatgctgttcaatcagcttcttgatatgccacacttgtcaggtggatggattatcttggaaaaggagaaatgctcactaacagggatgtaaacaaatttgggcAAAAAATTTGAGAGACATttcttg

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1444711 True 273 lncRNA 0.38 1 17786255 17786527

Neighbor

gene id symbol gene type direction distance location
LOC110489719 LOC106590432 coding upstream 144447 17537295 ~ 17641808 (+)
LOC110490933 LOC106590429 coding upstream 313293 17244157 ~ 17472962 (+)
LOC118938946 NA coding upstream 555695 17228750 ~ 17230560 (+)
ggh LOC106590426 coding upstream 1066546 16716150 ~ 16719709 (+)
LOC100136240 LOC100136240 coding upstream 1099607 16680278 ~ 16686648 (+)
LOC110489724 LOC106590359 coding downstream 203318 17989845 ~ 18092131 (+)
dnah5l LOC106590358 coding downstream 315160 18101687 ~ 18171361 (+)
LOC110489727 LOC106590362 coding downstream 441302 18227829 ~ 18275594 (+)
LOC110489731 LOC106590368 coding downstream 519687 18306214 ~ 18325293 (+)
scn5lab LOC106590371 coding downstream 603630 18390157 ~ 18580116 (+)
G1264417 NA non-coding upstream 9084 17776762 ~ 17777171 (+)
G1264409 NA non-coding upstream 15405 17770416 ~ 17770850 (+)
G1264001 NA non-coding upstream 137856 17648140 ~ 17648399 (+)
G1263994 NA non-coding upstream 161116 17624146 ~ 17625139 (+)
G1263915 NA non-coding upstream 318183 17467811 ~ 17468072 (+)
G1264440 NA non-coding downstream 5633 17792160 ~ 17792475 (+)
G1264497 NA non-coding downstream 44512 17831039 ~ 17831251 (+)
G1264498 NA non-coding downstream 45190 17831717 ~ 17831970 (+)
G1264545 NA non-coding downstream 84764 17871291 ~ 17871513 (+)
G1264551 NA non-coding downstream 88771 17875298 ~ 17875544 (+)
mcmdc2 mcmdc2 other upstream 1892091 15885437 ~ 15895996 (+)
G1261980 NA other upstream 2049838 15735930 ~ 15736417 (+)
LOC110489686 LOC106590396 other upstream 2079716 15696896 ~ 15706601 (+)
LOC110489660 pan3 other upstream 2591310 15166247 ~ 15194945 (+)
G1260946 LOC106590444 other upstream 2764202 15020992 ~ 15022053 (+)
LOC110489737 LOC106590377 other downstream 1073584 18859697 ~ 18866106 (+)
epb41l3a LOC106590342 other downstream 1887586 19598284 ~ 19680110 (+)
G1267949 pck2 other downstream 3053768 20840295 ~ 20841398 (+)
slc12a7b LOC106590280 other downstream 3999694 21729755 ~ 21794253 (+)
LOC110489812 rdh12 other downstream 5346332 23132828 ~ 23146739 (+)

Expression


Co-expression Network