Gene
RNA
| Item | Value |
|---|---|
| gene id | G1264509 |
| gene name | LOC106590351 |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048579.1 |
| NCBI id | CM023233.2 |
| chromosome length | 81569517 |
| location | 17842730 ~ 17842986 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| description |
|---|
| PREDICTED: splicing factor 3A subunit 2-like |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU1444787 | True | 257 | lncRNA | 0.52 | 1 | 17842730 | 17842986 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110489722 | LOC106590357 | coding | downstream | 86208 | 17751248 ~ 17756522 (-) |
| LOC110489721 | LOC106590355 | coding | downstream | 96432 | 17742649 ~ 17746298 (-) |
| bcl2a | LOC106590353 | coding | downstream | 113940 | 17661711 ~ 17728790 (-) |
| LOC110489717 | LOC106590430 | coding | downstream | 314720 | 17476964 ~ 17528010 (-) |
| actr3b | LOC106590428 | coding | downstream | 616290 | 17207282 ~ 17226440 (-) |
| LOC118938947 | NA | coding | upstream | 253738 | 18096724 ~ 18097899 (-) |
| cavin4b | LOC106590360 | coding | upstream | 326736 | 18169722 ~ 18178814 (-) |
| LOC110489726 | LOC106590361 | coding | upstream | 353089 | 18196075 ~ 18208500 (-) |
| LOC110489728 | NA | coding | upstream | 432490 | 18275476 ~ 18291919 (-) |
| LOC110489729 | LOC106590364 | coding | upstream | 449041 | 18292027 ~ 18301287 (-) |
| G1264408 | NA | non-coding | downstream | 73376 | 17769036 ~ 17769354 (-) |
| G1264340 | NA | non-coding | downstream | 193374 | 17649154 ~ 17649356 (-) |
| G1264335 | NA | non-coding | downstream | 200271 | 17642170 ~ 17642459 (-) |
| G1264310 | NA | non-coding | downstream | 244696 | 17597735 ~ 17598034 (-) |
| G1264298 | NA | non-coding | downstream | 257791 | 17584604 ~ 17584939 (-) |
| G1264566 | NA | non-coding | upstream | 44062 | 17887048 ~ 17887255 (-) |
| G1264581 | NA | non-coding | upstream | 54822 | 17897808 ~ 17898040 (-) |
| G1264598 | NA | non-coding | upstream | 65524 | 17908510 ~ 17908714 (-) |
| G1264734 | NA | non-coding | upstream | 80349 | 17923335 ~ 17923588 (-) |
| G1264738 | NA | non-coding | upstream | 87684 | 17930670 ~ 17930910 (-) |
| G1264199 | LOC106590429 | other | downstream | 379753 | 17461828 ~ 17462977 (-) |
| G1263444 | NA | other | downstream | 1196313 | 16645644 ~ 16646417 (-) |
| G1262745 | NA | other | downstream | 1566178 | 16276009 ~ 16276552 (-) |
| LOC110490929 | LOC106590401 | other | downstream | 1807608 | 15938237 ~ 16035283 (-) |
| LOC110489690 | LOC106590399 | other | downstream | 1997589 | 15821701 ~ 15845199 (-) |
| G1265249 | NA | other | upstream | 340805 | 18183791 ~ 18184123 (-) |
| G1265456 | LOC106590371 | other | upstream | 733553 | 18576539 ~ 18580163 (-) |
| G1266471 | NA | other | upstream | 1265573 | 19108559 ~ 19109357 (-) |
| G1266708 | LOC106590345 | other | upstream | 1592032 | 19435018 ~ 19453770 (-) |
| G1267414 | NA | other | upstream | 2424980 | 20267966 ~ 20268488 (-) |
